Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.67□□□□□ -0.22
SDCBPO00560 AC138035.3-201ENST00000622706 2791 ntBASIC13.67□□□□□ -0.22
SDCBPO00560 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SDCBPO00560 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDCBPO00560 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.67□□□□□ -0.22
SDCBPO00560 AL109954.1-202ENST00000564051 2148 ntBASIC13.67□□□□□ -0.22
SDCBPO00560 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDCBPO00560 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SDCBPO00560 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDCBPO00560 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDCBPO00560 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDCBPO00560 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDCBPO00560 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.66□□□□□ -0.22
SDCBPO00560 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.66□□□□□ -0.22
SDCBPO00560 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SDCBPO00560 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SDCBPO00560 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.66□□□□□ -0.22
SDCBPO00560 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
SDCBPO00560 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.66□□□□□ -0.22
SDCBPO00560 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.66□□□□□ -0.22
SDCBPO00560 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.66□□□□□ -0.22
SDCBPO00560 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.66□□□□□ -0.22
SDCBPO00560 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.66□□□□□ -0.22
SDCBPO00560 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.66□□□□□ -0.22
SDCBPO00560 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.66□□□□□ -0.22
SDCBPO00560 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 AL031055.1-201ENST00000606362 631 ntBASIC13.66□□□□□ -0.22
SDCBPO00560 Z83851.2-201ENST00000609564 659 ntBASIC13.66□□□□□ -0.22
SDCBPO00560 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.66□□□□□ -0.22
SDCBPO00560 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.66□□□□□ -0.22
SDCBPO00560 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 TMBIM7P-203ENST00000641617 1718 ntBASIC13.66□□□□□ -0.22
SDCBPO00560 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.66□□□□□ -0.22
SDCBPO00560 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SDCBPO00560 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SDCBPO00560 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 AC008677.1-201ENST00000519230 1561 ntBASIC13.66□□□□□ -0.22
SDCBPO00560 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDCBPO00560 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SDCBPO00560 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SDCBPO00560 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.65□□□□□ -0.22
SDCBPO00560 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SDCBPO00560 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SDCBPO00560 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SDCBPO00560 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
SDCBPO00560 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.65□□□□□ -0.22
SDCBPO00560 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SDCBPO00560 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SDCBPO00560 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SDCBPO00560 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.65□□□□□ -0.22
SDCBPO00560 RNU1-129P-201ENST00000384064 167 ntBASIC13.65□□□□□ -0.22
SDCBPO00560 HMGA1P7-201ENST00000406908 502 ntBASIC13.65□□□□□ -0.22
SDCBPO00560 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SDCBPO00560 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SDCBPO00560 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SDCBPO00560 IGLL3P-201ENST00000412472 434 ntBASIC13.65□□□□□ -0.22
SDCBPO00560 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.65□□□□□ -0.22
SDCBPO00560 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
SDCBPO00560 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
SDCBPO00560 U1.21-201ENST00000580816 167 ntBASIC13.65□□□□□ -0.22
SDCBPO00560 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.65□□□□□ -0.22
SDCBPO00560 AC010507.1-201ENST00000633895 436 ntBASIC13.65□□□□□ -0.22
SDCBPO00560 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SDCBPO00560 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SDCBPO00560 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SDCBPO00560 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.65□□□□□ -0.22
SDCBPO00560 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SDCBPO00560 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
SDCBPO00560 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.65□□□□□ -0.22
SDCBPO00560 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SDCBPO00560 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SDCBPO00560 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SDCBPO00560 AC087481.3-201ENST00000602886 1894 ntBASIC13.65□□□□□ -0.22
SDCBPO00560 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SDCBPO00560 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SDCBPO00560 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SDCBPO00560 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SDCBPO00560 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SDCBPO00560 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
SDCBPO00560 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.64□□□□□ -0.23
SDCBPO00560 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SDCBPO00560 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SDCBPO00560 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms