Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.09■□□□□ 0.33
FOXN3O00409 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXN3O00409 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXN3O00409 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
FOXN3O00409 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
FOXN3O00409 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.09■□□□□ 0.33
FOXN3O00409 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
FOXN3O00409 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXN3O00409 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
FOXN3O00409 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXN3O00409 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXN3O00409 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.09■□□□□ 0.33
FOXN3O00409 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 AC003101.2-201ENST00000612557 442 ntBASIC17.09■□□□□ 0.33
FOXN3O00409 AC009093.7-201ENST00000623853 1223 ntBASIC17.09■□□□□ 0.33
FOXN3O00409 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXN3O00409 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXN3O00409 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
FOXN3O00409 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
FOXN3O00409 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
FOXN3O00409 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.09■□□□□ 0.33
FOXN3O00409 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXN3O00409 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
FOXN3O00409 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FOXN3O00409 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FOXN3O00409 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXN3O00409 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FOXN3O00409 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXN3O00409 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.08■□□□□ 0.33
FOXN3O00409 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.08■□□□□ 0.33
FOXN3O00409 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.08■□□□□ 0.33
FOXN3O00409 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.08■□□□□ 0.33
FOXN3O00409 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FOXN3O00409 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.08■□□□□ 0.33
FOXN3O00409 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXN3O00409 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXN3O00409 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXN3O00409 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FOXN3O00409 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXN3O00409 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.08■□□□□ 0.33
FOXN3O00409 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXN3O00409 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXN3O00409 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXN3O00409 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXN3O00409 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXN3O00409 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
FOXN3O00409 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXN3O00409 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXN3O00409 AL353705.2-201ENST00000428243 662 ntBASIC17.08■□□□□ 0.32
FOXN3O00409 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.08■□□□□ 0.32
FOXN3O00409 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.08■□□□□ 0.32
FOXN3O00409 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXN3O00409 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXN3O00409 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXN3O00409 AC134684.3-201ENST00000641758 218 ntBASIC17.08■□□□□ 0.32
FOXN3O00409 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXN3O00409 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXN3O00409 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXN3O00409 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXN3O00409 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXN3O00409 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXN3O00409 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXN3O00409 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXN3O00409 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
FOXN3O00409 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXN3O00409 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
FOXN3O00409 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
FOXN3O00409 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXN3O00409 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXN3O00409 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXN3O00409 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXN3O00409 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXN3O00409 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
FOXN3O00409 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXN3O00409 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXN3O00409 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXN3O00409 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXN3O00409 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXN3O00409 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.07■□□□□ 0.32
FOXN3O00409 AC254562.1-201ENST00000417586 456 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms