Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
PDLIM1O00151 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PDLIM1O00151 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PDLIM1O00151 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.32■□□□□ 0.04
PDLIM1O00151 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.32■□□□□ 0.04
PDLIM1O00151 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.32■□□□□ 0.04
PDLIM1O00151 MPDU1-223ENST00000582151 728 ntBASIC15.32■□□□□ 0.04
PDLIM1O00151 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.32■□□□□ 0.04
PDLIM1O00151 FAM215A-202ENST00000632077 792 ntBASIC15.32■□□□□ 0.04
PDLIM1O00151 AC107918.4-202ENST00000641623 219 ntBASIC15.32■□□□□ 0.04
PDLIM1O00151 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM1O00151 AL590787.1-201ENST00000568856 1315 ntBASIC15.32■□□□□ 0.04
PDLIM1O00151 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM1O00151 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
PDLIM1O00151 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM1O00151 CICP23-201ENST00000605013 2741 ntBASIC15.32■□□□□ 0.04
PDLIM1O00151 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.32■□□□□ 0.04
PDLIM1O00151 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.32■□□□□ 0.04
PDLIM1O00151 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PDLIM1O00151 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.32■□□□□ 0.04
PDLIM1O00151 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM1O00151 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM1O00151 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM1O00151 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM1O00151 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.32■□□□□ 0.04
PDLIM1O00151 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.31■□□□□ 0.04
PDLIM1O00151 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM1O00151 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM1O00151 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.31■□□□□ 0.04
PDLIM1O00151 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
PDLIM1O00151 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.31■□□□□ 0.04
PDLIM1O00151 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM1O00151 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.31■□□□□ 0.04
PDLIM1O00151 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM1O00151 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.31■□□□□ 0.04
PDLIM1O00151 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM1O00151 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM1O00151 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PDLIM1O00151 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PDLIM1O00151 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.31■□□□□ 0.04
PDLIM1O00151 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM1O00151 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.31■□□□□ 0.04
PDLIM1O00151 RPS2P1-201ENST00000434010 821 ntBASIC15.31■□□□□ 0.04
PDLIM1O00151 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.31■□□□□ 0.04
PDLIM1O00151 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.31■□□□□ 0.04
PDLIM1O00151 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.31■□□□□ 0.04
PDLIM1O00151 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.31■□□□□ 0.04
PDLIM1O00151 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.31■□□□□ 0.04
PDLIM1O00151 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.31■□□□□ 0.04
PDLIM1O00151 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.31■□□□□ 0.04
PDLIM1O00151 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.31■□□□□ 0.04
PDLIM1O00151 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.31■□□□□ 0.04
PDLIM1O00151 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM1O00151 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.31■□□□□ 0.04
PDLIM1O00151 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.31■□□□□ 0.04
PDLIM1O00151 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM1O00151 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.31■□□□□ 0.04
PDLIM1O00151 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM1O00151 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM1O00151 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM1O00151 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PDLIM1O00151 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM1O00151 AL390755.1-201ENST00000623716 2027 ntBASIC15.31■□□□□ 0.04
PDLIM1O00151 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM1O00151 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM1O00151 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.31■□□□□ 0.04
PDLIM1O00151 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PDLIM1O00151 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM1O00151 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.31■□□□□ 0.04
PDLIM1O00151 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PDLIM1O00151 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PDLIM1O00151 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.3■□□□□ 0.04
PDLIM1O00151 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PDLIM1O00151 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.3■□□□□ 0.04
PDLIM1O00151 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.3■□□□□ 0.04
PDLIM1O00151 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.3■□□□□ 0.04
PDLIM1O00151 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PDLIM1O00151 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.3■□□□□ 0.04
PDLIM1O00151 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 LAGE3P1-201ENST00000425356 484 ntBASIC15.3■□□□□ 0.04
PDLIM1O00151 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PDLIM1O00151 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PDLIM1O00151 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.3■□□□□ 0.04
PDLIM1O00151 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.3■□□□□ 0.04
PDLIM1O00151 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms