Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 PHKG1P2-201ENST00000457537 863 ntBASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 IGHV3-71-201ENST00000523324 359 ntBASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 AL033527.5-201ENST00000641382 801 ntBASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 CDC14C-201ENST00000428251 1719 ntBASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 AC084018.2-201ENST00000613093 2607 ntBASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 ARSEP1-201ENST00000420443 635 ntBASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 HILS1-202ENST00000545329 423 ntBASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 AC036164.1-201ENST00000570544 333 ntBASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 REXO1L1P-202ENST00000608646 1974 ntBASIC15.86■□□□□ 0.13
TBC1D3FA6NER0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 RPL13P2-201ENST00000440687 659 ntBASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 AC092552.1-201ENST00000547243 906 ntBASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms