Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.42■□□□□ 0.38
CCDC66A2RUB6 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 RPS15P9-201ENST00000494093 319 ntBASIC17.42■□□□□ 0.38
CCDC66A2RUB6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 LINC01711-201ENST00000598340 967 ntBASIC17.42■□□□□ 0.38
CCDC66A2RUB6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 STK40-201ENST00000359297 4837 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 AC010491.1-201ENST00000563101 2797 ntBASIC17.41■□□□□ 0.38
CCDC66A2RUB6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 AKR1C7P-201ENST00000305623 895 ntBASIC17.41■□□□□ 0.38
CCDC66A2RUB6 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.41■□□□□ 0.38
CCDC66A2RUB6 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.41■□□□□ 0.38
CCDC66A2RUB6 KRT18P27-201ENST00000427733 1299 ntBASIC17.41■□□□□ 0.38
CCDC66A2RUB6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 AC010654.1-201ENST00000615722 808 ntBASIC17.41■□□□□ 0.38
CCDC66A2RUB6 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCDC66A2RUB6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 AC006486.2-201ENST00000624246 2199 ntBASIC17.4■□□□□ 0.38
CCDC66A2RUB6 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 AC020765.3-201ENST00000613051 740 ntBASIC17.4■□□□□ 0.38
CCDC66A2RUB6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms