Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 LAGE3P1-201ENST00000425356 484 ntBASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 FAM8A3P-201ENST00000427218 844 ntBASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 KRT18P27-201ENST00000427733 1299 ntBASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 FGFR3P6-201ENST00000457012 610 ntBASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 AC138894.3-201ENST00000603787 634 ntBASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 AC008667.4-201ENST00000607370 168 ntBASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 AC073621.1-201ENST00000392730 636 ntBASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 AC002347.1-201ENST00000569543 541 ntBASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TCRBV3S1A0A5B6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TCRBV3S1A0A5B6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TCRBV3S1A0A5B6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TCRBV3S1A0A5B6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
TCRBV3S1A0A5B6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.96□□□□□ -0.02
TCRBV3S1A0A5B6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TCRBV3S1A0A5B6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 FAM185BP-201ENST00000443595 716 ntBASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 IGHV3-65-201ENST00000523210 341 ntBASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 OR7E47P-204ENST00000575924 449 ntBASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 RN7SL850P-201ENST00000579959 291 ntBASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 AL732292.2-201ENST00000609649 430 ntBASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms