Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 AL356488.2-201ENST00000602755 427 ntBASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 AC011477.6-201ENST00000604980 1927 ntBASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 PMS2P4-201ENST00000412466 1052 ntBASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 HCG4P8-203ENST00000443049 980 ntBASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 AC108073.2-201ENST00000464002 357 ntBASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 AP002469.2-201ENST00000531724 424 ntBASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 AC009090.5-201ENST00000624886 2285 ntBASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 FAM45BP-202ENST00000592932 1624 ntBASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 C18orf15-201ENST00000623680 2534 ntBASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 AC112693.3-201ENST00000624819 1983 ntBASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 AC134407.2-201ENST00000625089 1978 ntBASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAV5A0A0B4J249 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms