Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC187A0A096LP49 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 AC079316.1-201ENST00000548397 411 ntBASIC15.07■□□□□ 0
CCDC187A0A096LP49 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 GPR182-203ENST00000622922 591 ntBASIC15.07■□□□□ 0
CCDC187A0A096LP49 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC187A0A096LP49 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC187A0A096LP49 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC187A0A096LP49 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC187A0A096LP49 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 AC105020.1-201ENST00000435356 2205 ntBASIC15.07■□□□□ 0
CCDC187A0A096LP49 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 AC084018.2-201ENST00000613093 2607 ntBASIC15.06■□□□□ 0
CCDC187A0A096LP49 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 YBX1P6-201ENST00000442962 1002 ntBASIC15.06■□□□□ 0
CCDC187A0A096LP49 VDAC1P7-201ENST00000462417 847 ntBASIC15.06■□□□□ 0
CCDC187A0A096LP49 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 AP001063.1-201ENST00000568332 529 ntBASIC15.06■□□□□ 0
CCDC187A0A096LP49 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 AC020907.1-201ENST00000616460 1350 ntBASIC15.06■□□□□ 0
CCDC187A0A096LP49 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CCDC187A0A096LP49 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC187A0A096LP49 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.05■□□□□ 0
CCDC187A0A096LP49 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC187A0A096LP49 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
CCDC187A0A096LP49 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC187A0A096LP49 AD000864.1-201ENST00000624076 2295 ntBASIC15.05■□□□□ 0
CCDC187A0A096LP49 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC187A0A096LP49 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CCDC187A0A096LP49 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
CCDC187A0A096LP49 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC187A0A096LP49 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC187A0A096LP49 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.05■□□□□ 0
CCDC187A0A096LP49 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC187A0A096LP49 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC187A0A096LP49 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.05■□□□□ -0
CCDC187A0A096LP49 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 AC092933.1-201ENST00000393644 945 ntBASIC15.05■□□□□ -0
CCDC187A0A096LP49 AC016694.1-201ENST00000434179 700 ntBASIC15.05■□□□□ -0
CCDC187A0A096LP49 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 AC012441.1-201ENST00000446669 685 ntBASIC15.05■□□□□ -0
CCDC187A0A096LP49 PFN1P12-201ENST00000455938 534 ntBASIC15.05■□□□□ -0
CCDC187A0A096LP49 PHKG1P2-201ENST00000457537 863 ntBASIC15.05■□□□□ -0
CCDC187A0A096LP49 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms