Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 TMPOP1-202ENST00000424642 1267 ntBASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 IER3-202ENST00000376377 1350 ntBASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV18A0A075B6X5 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 AC005089.1-201ENST00000619486 2241 ntBASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 AC021097.1-201ENST00000607902 574 ntBASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV18A0A075B6X5 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms