Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 AL121603.2-201ENST00000557373 2117 ntBASIC21.89■■□□□ 1.09
COMMD3-BMI1R4GMX3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COMMD3-BMI1R4GMX3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
COMMD3-BMI1R4GMX3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COMMD3-BMI1R4GMX3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COMMD3-BMI1R4GMX3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COMMD3-BMI1R4GMX3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COMMD3-BMI1R4GMX3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
COMMD3-BMI1R4GMX3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.88■■□□□ 1.09
COMMD3-BMI1R4GMX3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.87■■□□□ 1.09
COMMD3-BMI1R4GMX3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COMMD3-BMI1R4GMX3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.87■■□□□ 1.09
COMMD3-BMI1R4GMX3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
COMMD3-BMI1R4GMX3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
COMMD3-BMI1R4GMX3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
COMMD3-BMI1R4GMX3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COMMD3-BMI1R4GMX3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
COMMD3-BMI1R4GMX3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COMMD3-BMI1R4GMX3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.86■■□□□ 1.09
COMMD3-BMI1R4GMX3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
COMMD3-BMI1R4GMX3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COMMD3-BMI1R4GMX3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
COMMD3-BMI1R4GMX3 AC137767.1-201ENST00000602918 1920 ntBASIC21.86■■□□□ 1.09
COMMD3-BMI1R4GMX3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.86■■□□□ 1.09
COMMD3-BMI1R4GMX3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.86■■□□□ 1.09
COMMD3-BMI1R4GMX3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COMMD3-BMI1R4GMX3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COMMD3-BMI1R4GMX3 AP003733.4-201ENST00000623785 1697 ntBASIC21.85■■□□□ 1.09
COMMD3-BMI1R4GMX3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
COMMD3-BMI1R4GMX3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.85■■□□□ 1.09
COMMD3-BMI1R4GMX3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.85■■□□□ 1.09
COMMD3-BMI1R4GMX3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COMMD3-BMI1R4GMX3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COMMD3-BMI1R4GMX3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.85■■□□□ 1.09
COMMD3-BMI1R4GMX3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COMMD3-BMI1R4GMX3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 DUX4L13-201ENST00000554103 1267 ntBASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 DUX4L15-201ENST00000611059 1267 ntBASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 DUX4L23-201ENST00000615195 1269 ntBASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 DUX4L24-201ENST00000617576 1269 ntBASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 DUX4L22-201ENST00000618238 1269 ntBASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 DUX4L20-201ENST00000619712 1269 ntBASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 DUX4L21-201ENST00000622058 1269 ntBASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 DUX4L10-201ENST00000622460 1267 ntBASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 DUX4L25-201ENST00000624915 1269 ntBASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COMMD3-BMI1R4GMX3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COMMD3-BMI1R4GMX3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COMMD3-BMI1R4GMX3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
COMMD3-BMI1R4GMX3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COMMD3-BMI1R4GMX3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COMMD3-BMI1R4GMX3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
COMMD3-BMI1R4GMX3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COMMD3-BMI1R4GMX3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COMMD3-BMI1R4GMX3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
COMMD3-BMI1R4GMX3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
COMMD3-BMI1R4GMX3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COMMD3-BMI1R4GMX3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COMMD3-BMI1R4GMX3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
COMMD3-BMI1R4GMX3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.82■■□□□ 1.08
COMMD3-BMI1R4GMX3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COMMD3-BMI1R4GMX3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.82■■□□□ 1.08
COMMD3-BMI1R4GMX3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COMMD3-BMI1R4GMX3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
COMMD3-BMI1R4GMX3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COMMD3-BMI1R4GMX3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.82■■□□□ 1.08
COMMD3-BMI1R4GMX3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COMMD3-BMI1R4GMX3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
COMMD3-BMI1R4GMX3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COMMD3-BMI1R4GMX3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COMMD3-BMI1R4GMX3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
COMMD3-BMI1R4GMX3 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.81■■□□□ 1.08
COMMD3-BMI1R4GMX3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COMMD3-BMI1R4GMX3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COMMD3-BMI1R4GMX3 AC233723.2-201ENST00000623798 2106 ntBASIC21.81■■□□□ 1.08
COMMD3-BMI1R4GMX3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
COMMD3-BMI1R4GMX3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COMMD3-BMI1R4GMX3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
COMMD3-BMI1R4GMX3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.8■■□□□ 1.08
COMMD3-BMI1R4GMX3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COMMD3-BMI1R4GMX3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COMMD3-BMI1R4GMX3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COMMD3-BMI1R4GMX3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COMMD3-BMI1R4GMX3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.8■■□□□ 1.08
COMMD3-BMI1R4GMX3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.79■■□□□ 1.08
COMMD3-BMI1R4GMX3 AC141586.4-201ENST00000624558 1573 ntBASIC21.79■■□□□ 1.08
COMMD3-BMI1R4GMX3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
COMMD3-BMI1R4GMX3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.79■■□□□ 1.08
COMMD3-BMI1R4GMX3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
COMMD3-BMI1R4GMX3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.79■■□□□ 1.08
COMMD3-BMI1R4GMX3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.79■■□□□ 1.08
COMMD3-BMI1R4GMX3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.79■■□□□ 1.08
COMMD3-BMI1R4GMX3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms