Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AF106564.1-201ENST00000607058 2553 ntBASIC12.31□□□□□ -0.44
LINC01558Q9Y6Z2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC01558Q9Y6Z2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC01558Q9Y6Z2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01558Q9Y6Z2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC01558Q9Y6Z2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01558Q9Y6Z2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01558Q9Y6Z2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01558Q9Y6Z2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01558Q9Y6Z2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01558Q9Y6Z2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01558Q9Y6Z2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01558Q9Y6Z2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01558Q9Y6Z2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01558Q9Y6Z2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01558Q9Y6Z2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01558Q9Y6Z2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01558Q9Y6Z2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01558Q9Y6Z2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC01558Q9Y6Z2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
LINC01558Q9Y6Z2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC01558Q9Y6Z2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC01558Q9Y6Z2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01558Q9Y6Z2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01558Q9Y6Z2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LINC01558Q9Y6Z2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC01558Q9Y6Z2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 AC141586.4-201ENST00000624558 1573 ntBASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 AC010501.1-201ENST00000606270 1962 ntBASIC12.29□□□□□ -0.44
LINC01558Q9Y6Z2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01558Q9Y6Z2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LINC01558Q9Y6Z2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01558Q9Y6Z2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01558Q9Y6Z2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01558Q9Y6Z2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01558Q9Y6Z2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01558Q9Y6Z2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01558Q9Y6Z2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01558Q9Y6Z2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC01558Q9Y6Z2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01558Q9Y6Z2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01558Q9Y6Z2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01558Q9Y6Z2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01558Q9Y6Z2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
LINC01558Q9Y6Z2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01558Q9Y6Z2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
LINC01558Q9Y6Z2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01558Q9Y6Z2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01558Q9Y6Z2 AP003733.4-201ENST00000623785 1697 ntBASIC12.27□□□□□ -0.45
LINC01558Q9Y6Z2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
LINC01558Q9Y6Z2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01558Q9Y6Z2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
LINC01558Q9Y6Z2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC12.27□□□□□ -0.45
LINC01558Q9Y6Z2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01558Q9Y6Z2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LINC01558Q9Y6Z2 AP002414.2-202ENST00000590929 1450 ntBASIC12.27□□□□□ -0.45
LINC01558Q9Y6Z2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01558Q9Y6Z2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 AP004609.3-201ENST00000610705 1884 ntBASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01558Q9Y6Z2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01558Q9Y6Z2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01558Q9Y6Z2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LINC01558Q9Y6Z2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01558Q9Y6Z2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01558Q9Y6Z2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms