Protein–RNA interactions for Protein: Q9Y6N6

LAMC3, Laminin subunit gamma-3, humanhuman

Predictions only

Length 1,575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC3Q9Y6N6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC41.32■■■■■ 4.2
LAMC3Q9Y6N6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC41.32■■■■■ 4.2
LAMC3Q9Y6N6 MIR4767-201ENST00000582827 78 ntBASIC41.32■■■■■ 4.2
LAMC3Q9Y6N6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC41.32■■■■■ 4.2
LAMC3Q9Y6N6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC41.31■■■■■ 4.2
LAMC3Q9Y6N6 AC027682.1-201ENST00000562846 899 ntBASIC41.31■■■■■ 4.2
LAMC3Q9Y6N6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC41.3■■■■■ 4.2
LAMC3Q9Y6N6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC41.3■■■■■ 4.2
LAMC3Q9Y6N6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC41.29■■■■■ 4.2
LAMC3Q9Y6N6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC41.29■■■■■ 4.2
LAMC3Q9Y6N6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC41.29■■■■■ 4.2
LAMC3Q9Y6N6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC41.29■■■■■ 4.2
LAMC3Q9Y6N6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC41.28■■■■■ 4.2
LAMC3Q9Y6N6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC41.28■■■■■ 4.2
LAMC3Q9Y6N6 MAG-206ENST00000597035 542 ntTSL 4 BASIC41.28■■■■■ 4.2
LAMC3Q9Y6N6 IKBKGP1-201ENST00000612193 1073 ntBASIC41.28■■■■■ 4.2
LAMC3Q9Y6N6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC41.27■■■■■ 4.2
LAMC3Q9Y6N6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC41.27■■■■■ 4.2
LAMC3Q9Y6N6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC41.25■■■■■ 4.19
LAMC3Q9Y6N6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC41.25■■■■■ 4.19
LAMC3Q9Y6N6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC41.25■■■■■ 4.19
LAMC3Q9Y6N6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC41.25■■■■■ 4.19
LAMC3Q9Y6N6 AC004448.1-201ENST00000458332 883 ntBASIC41.25■■■■■ 4.19
LAMC3Q9Y6N6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC41.24■■■■■ 4.19
LAMC3Q9Y6N6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC41.24■■■■■ 4.19
LAMC3Q9Y6N6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC41.24■■■■■ 4.19
LAMC3Q9Y6N6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC41.23■■■■■ 4.19
LAMC3Q9Y6N6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC41.23■■■■■ 4.19
LAMC3Q9Y6N6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC41.23■■■■■ 4.19
LAMC3Q9Y6N6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC41.23■■■■■ 4.19
LAMC3Q9Y6N6 AC142472.1-201ENST00000612013 1741 ntBASIC41.23■■■■■ 4.19
LAMC3Q9Y6N6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC41.22■■■■■ 4.19
LAMC3Q9Y6N6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC41.22■■■■■ 4.19
LAMC3Q9Y6N6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC41.21■■■■■ 4.19
LAMC3Q9Y6N6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC41.21■■■■■ 4.19
LAMC3Q9Y6N6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC41.21■■■■■ 4.19
LAMC3Q9Y6N6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC41.21■■■■■ 4.19
LAMC3Q9Y6N6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC41.21■■■■■ 4.19
LAMC3Q9Y6N6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC41.21■■■■■ 4.19
LAMC3Q9Y6N6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC41.2■■■■■ 4.19
LAMC3Q9Y6N6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC41.2■■■■■ 4.19
LAMC3Q9Y6N6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC41.2■■■■■ 4.19
LAMC3Q9Y6N6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC41.2■■■■■ 4.19
LAMC3Q9Y6N6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC41.19■■■■■ 4.18
LAMC3Q9Y6N6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC41.19■■■■■ 4.18
LAMC3Q9Y6N6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC41.19■■■■■ 4.18
LAMC3Q9Y6N6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC41.19■■■■■ 4.18
LAMC3Q9Y6N6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC41.18■■■■■ 4.18
LAMC3Q9Y6N6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC41.18■■■■■ 4.18
LAMC3Q9Y6N6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC41.18■■■■■ 4.18
LAMC3Q9Y6N6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC41.17■■■■■ 4.18
LAMC3Q9Y6N6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC41.17■■■■■ 4.18
LAMC3Q9Y6N6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC41.16■■■■■ 4.18
LAMC3Q9Y6N6 AC092437.1-201ENST00000624794 1048 ntBASIC41.16■■■■■ 4.18
LAMC3Q9Y6N6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC41.16■■■■■ 4.18
LAMC3Q9Y6N6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC41.16■■■■■ 4.18
LAMC3Q9Y6N6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC41.16■■■■■ 4.18
LAMC3Q9Y6N6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC41.16■■■■■ 4.18
LAMC3Q9Y6N6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC41.16■■■■■ 4.18
LAMC3Q9Y6N6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC41.15■■■■■ 4.18
LAMC3Q9Y6N6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC41.15■■■■■ 4.18
LAMC3Q9Y6N6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC41.15■■■■■ 4.18
LAMC3Q9Y6N6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC41.15■■■■■ 4.18
LAMC3Q9Y6N6 IRS3P-201ENST00000223076 1006 ntBASIC41.15■■■■■ 4.18
LAMC3Q9Y6N6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC41.15■■■■■ 4.18
LAMC3Q9Y6N6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC41.15■■■■■ 4.18
LAMC3Q9Y6N6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC41.14■■■■■ 4.18
LAMC3Q9Y6N6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC41.14■■■■■ 4.18
LAMC3Q9Y6N6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC41.13■■■■■ 4.18
LAMC3Q9Y6N6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC41.13■■■■■ 4.18
LAMC3Q9Y6N6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC41.13■■■■■ 4.18
LAMC3Q9Y6N6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC41.13■■■■■ 4.17
LAMC3Q9Y6N6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC41.12■■■■■ 4.17
LAMC3Q9Y6N6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC41.12■■■■■ 4.17
LAMC3Q9Y6N6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC41.12■■■■■ 4.17
LAMC3Q9Y6N6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC41.12■■■■■ 4.17
LAMC3Q9Y6N6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC41.12■■■■■ 4.17
LAMC3Q9Y6N6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC41.12■■■■■ 4.17
LAMC3Q9Y6N6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC41.11■■■■■ 4.17
LAMC3Q9Y6N6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC41.11■■■■■ 4.17
LAMC3Q9Y6N6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC41.11■■■■■ 4.17
LAMC3Q9Y6N6 KRT18P5-201ENST00000436075 1291 ntBASIC41.11■■■■■ 4.17
LAMC3Q9Y6N6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC41.11■■■■■ 4.17
LAMC3Q9Y6N6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC41.1■■■■■ 4.17
LAMC3Q9Y6N6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC41.1■■■■■ 4.17
LAMC3Q9Y6N6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC41.1■■■■■ 4.17
LAMC3Q9Y6N6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC41.1■■■■■ 4.17
LAMC3Q9Y6N6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC41.1■■■■■ 4.17
LAMC3Q9Y6N6 AC034268.1-201ENST00000441047 882 ntBASIC41.09■■■■■ 4.17
LAMC3Q9Y6N6 AC011298.3-201ENST00000615796 283 ntBASIC41.09■■■■■ 4.17
LAMC3Q9Y6N6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC41.09■■■■■ 4.17
LAMC3Q9Y6N6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC41.08■■■■■ 4.17
LAMC3Q9Y6N6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC41.08■■■■■ 4.17
LAMC3Q9Y6N6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC41.08■■■■■ 4.17
LAMC3Q9Y6N6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC41.08■■■■■ 4.17
LAMC3Q9Y6N6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC41.08■■■■■ 4.17
LAMC3Q9Y6N6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC41.08■■■■■ 4.17
LAMC3Q9Y6N6 AL137784.2-201ENST00000607332 1000 ntBASIC41.08■■■■■ 4.17
LAMC3Q9Y6N6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC41.07■■■■■ 4.17
LAMC3Q9Y6N6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC41.07■■■■■ 4.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms