Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHA2Q9Y5H9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHA2Q9Y5H9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
PCDHA2Q9Y5H9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
PCDHA2Q9Y5H9 AL592295.1-201ENST00000400984 884 ntBASIC26.4■■□□□ 1.82
PCDHA2Q9Y5H9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.4■■□□□ 1.82
PCDHA2Q9Y5H9 AC120024.1-201ENST00000562672 995 ntBASIC26.4■■□□□ 1.82
PCDHA2Q9Y5H9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHA2Q9Y5H9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.39■■□□□ 1.82
PCDHA2Q9Y5H9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
PCDHA2Q9Y5H9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.39■■□□□ 1.82
PCDHA2Q9Y5H9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.39■■□□□ 1.82
PCDHA2Q9Y5H9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHA2Q9Y5H9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.39■■□□□ 1.82
PCDHA2Q9Y5H9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHA2Q9Y5H9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PCDHA2Q9Y5H9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.38■■□□□ 1.81
PCDHA2Q9Y5H9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHA2Q9Y5H9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHA2Q9Y5H9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHA2Q9Y5H9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
PCDHA2Q9Y5H9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.38■■□□□ 1.81
PCDHA2Q9Y5H9 BX664725.1-201ENST00000438252 379 ntBASIC26.38■■□□□ 1.81
PCDHA2Q9Y5H9 AL356441.2-201ENST00000443009 864 ntBASIC26.38■■□□□ 1.81
PCDHA2Q9Y5H9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
PCDHA2Q9Y5H9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.38■■□□□ 1.81
PCDHA2Q9Y5H9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHA2Q9Y5H9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.37■■□□□ 1.81
PCDHA2Q9Y5H9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHA2Q9Y5H9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
PCDHA2Q9Y5H9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHA2Q9Y5H9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHA2Q9Y5H9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
PCDHA2Q9Y5H9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHA2Q9Y5H9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.36■■□□□ 1.81
PCDHA2Q9Y5H9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.36■■□□□ 1.81
PCDHA2Q9Y5H9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.36■■□□□ 1.81
PCDHA2Q9Y5H9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHA2Q9Y5H9 KRT125P-201ENST00000546827 989 ntBASIC26.36■■□□□ 1.81
PCDHA2Q9Y5H9 AC131212.1-201ENST00000613771 668 ntBASIC26.36■■□□□ 1.81
PCDHA2Q9Y5H9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
PCDHA2Q9Y5H9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
PCDHA2Q9Y5H9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
PCDHA2Q9Y5H9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHA2Q9Y5H9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHA2Q9Y5H9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHA2Q9Y5H9 AC137630.3-201ENST00000607245 391 ntBASIC26.35■■□□□ 1.81
PCDHA2Q9Y5H9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA2Q9Y5H9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHA2Q9Y5H9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA2Q9Y5H9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA2Q9Y5H9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA2Q9Y5H9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA2Q9Y5H9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA2Q9Y5H9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
PCDHA2Q9Y5H9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.34■■□□□ 1.81
PCDHA2Q9Y5H9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA2Q9Y5H9 MIR4787-201ENST00000607364 84 ntBASIC26.34■■□□□ 1.81
PCDHA2Q9Y5H9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.34■■□□□ 1.81
PCDHA2Q9Y5H9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA2Q9Y5H9 SLC6A10P-202ENST00000431994 2058 ntBASIC26.34■■□□□ 1.81
PCDHA2Q9Y5H9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHA2Q9Y5H9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHA2Q9Y5H9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHA2Q9Y5H9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
PCDHA2Q9Y5H9 AC022211.4-201ENST00000625094 2161 ntBASIC26.32■■□□□ 1.8
PCDHA2Q9Y5H9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.32■■□□□ 1.8
PCDHA2Q9Y5H9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHA2Q9Y5H9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHA2Q9Y5H9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHA2Q9Y5H9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHA2Q9Y5H9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHA2Q9Y5H9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHA2Q9Y5H9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHA2Q9Y5H9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.31■■□□□ 1.8
PCDHA2Q9Y5H9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
PCDHA2Q9Y5H9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.31■■□□□ 1.8
PCDHA2Q9Y5H9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA2Q9Y5H9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA2Q9Y5H9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA2Q9Y5H9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA2Q9Y5H9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.3■■□□□ 1.8
PCDHA2Q9Y5H9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA2Q9Y5H9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.3■■□□□ 1.8
PCDHA2Q9Y5H9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA2Q9Y5H9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.3■■□□□ 1.8
PCDHA2Q9Y5H9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA2Q9Y5H9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA2Q9Y5H9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
PCDHA2Q9Y5H9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHA2Q9Y5H9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.29■■□□□ 1.8
PCDHA2Q9Y5H9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHA2Q9Y5H9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
PCDHA2Q9Y5H9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.28■■□□□ 1.8
PCDHA2Q9Y5H9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
PCDHA2Q9Y5H9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.28■■□□□ 1.8
PCDHA2Q9Y5H9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHA2Q9Y5H9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHA2Q9Y5H9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHA2Q9Y5H9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms