Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SPCS2P3-201ENST00000500401 656 ntBASIC22.69■■□□□ 1.22
PCDHGA11Q9Y5H2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA11Q9Y5H2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA11Q9Y5H2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.69■■□□□ 1.22
PCDHGA11Q9Y5H2 FOXO3B-201ENST00000395675 1928 ntBASIC22.69■■□□□ 1.22
PCDHGA11Q9Y5H2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
PCDHGA11Q9Y5H2 RPS2P7-201ENST00000447334 885 ntBASIC22.68■■□□□ 1.22
PCDHGA11Q9Y5H2 MIR6765-201ENST00000614092 87 ntBASIC22.68■■□□□ 1.22
PCDHGA11Q9Y5H2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHGA11Q9Y5H2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA11Q9Y5H2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA11Q9Y5H2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHGA11Q9Y5H2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PCDHGA11Q9Y5H2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHGA11Q9Y5H2 AL139125.2-201ENST00000623134 1869 ntBASIC22.67■■□□□ 1.22
PCDHGA11Q9Y5H2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHGA11Q9Y5H2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PCDHGA11Q9Y5H2 ABHD17AP5-201ENST00000580133 923 ntBASIC22.67■■□□□ 1.22
PCDHGA11Q9Y5H2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHGA11Q9Y5H2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHGA11Q9Y5H2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA11Q9Y5H2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA11Q9Y5H2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA11Q9Y5H2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHGA11Q9Y5H2 DUX4L9-201ENST00000449051 1259 ntBASIC22.66■■□□□ 1.22
PCDHGA11Q9Y5H2 MIR6089-201ENST00000616698 64 ntBASIC22.66■■□□□ 1.22
PCDHGA11Q9Y5H2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.66■■□□□ 1.22
PCDHGA11Q9Y5H2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHGA11Q9Y5H2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.66■■□□□ 1.22
PCDHGA11Q9Y5H2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHGA11Q9Y5H2 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.65■■□□□ 1.22
PCDHGA11Q9Y5H2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA11Q9Y5H2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.65■■□□□ 1.22
PCDHGA11Q9Y5H2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA11Q9Y5H2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
PCDHGA11Q9Y5H2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
PCDHGA11Q9Y5H2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA11Q9Y5H2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGA11Q9Y5H2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGA11Q9Y5H2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.64■■□□□ 1.22
PCDHGA11Q9Y5H2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGA11Q9Y5H2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGA11Q9Y5H2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGA11Q9Y5H2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHGA11Q9Y5H2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGA11Q9Y5H2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHGA11Q9Y5H2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGA11Q9Y5H2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA11Q9Y5H2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA11Q9Y5H2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDHGA11Q9Y5H2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.63■■□□□ 1.21
PCDHGA11Q9Y5H2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA11Q9Y5H2 AC129492.7-201ENST00000622992 756 ntBASIC22.63■■□□□ 1.21
PCDHGA11Q9Y5H2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA11Q9Y5H2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA11Q9Y5H2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA11Q9Y5H2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA11Q9Y5H2 KRT18P60-201ENST00000312876 1297 ntBASIC22.62■■□□□ 1.21
PCDHGA11Q9Y5H2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA11Q9Y5H2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.62■■□□□ 1.21
PCDHGA11Q9Y5H2 AC087393.1-201ENST00000582896 145 ntBASIC22.62■■□□□ 1.21
PCDHGA11Q9Y5H2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA11Q9Y5H2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA11Q9Y5H2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA11Q9Y5H2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA11Q9Y5H2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA11Q9Y5H2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA11Q9Y5H2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA11Q9Y5H2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA11Q9Y5H2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
PCDHGA11Q9Y5H2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDHGA11Q9Y5H2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA11Q9Y5H2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA11Q9Y5H2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA11Q9Y5H2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDHGA11Q9Y5H2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDHGA11Q9Y5H2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDHGA11Q9Y5H2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
PCDHGA11Q9Y5H2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
PCDHGA11Q9Y5H2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA11Q9Y5H2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA11Q9Y5H2 NTF6A-201ENST00000591175 560 ntBASIC22.6■■□□□ 1.21
PCDHGA11Q9Y5H2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA11Q9Y5H2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA11Q9Y5H2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA11Q9Y5H2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA11Q9Y5H2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA11Q9Y5H2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
PCDHGA11Q9Y5H2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA11Q9Y5H2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA11Q9Y5H2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA11Q9Y5H2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA11Q9Y5H2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA11Q9Y5H2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.59■■□□□ 1.21
PCDHGA11Q9Y5H2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHGA11Q9Y5H2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHGA11Q9Y5H2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA11Q9Y5H2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA11Q9Y5H2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA11Q9Y5H2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms