Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA9Q9Y5G4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHGA9Q9Y5G4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA9Q9Y5G4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHGA9Q9Y5G4 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHGA9Q9Y5G4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA9Q9Y5G4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PCDHGA9Q9Y5G4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.95■■□□□ 1.1
PCDHGA9Q9Y5G4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA9Q9Y5G4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA9Q9Y5G4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGA9Q9Y5G4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDHGA9Q9Y5G4 AC010997.5-201ENST00000609182 354 ntBASIC21.94■■□□□ 1.1
PCDHGA9Q9Y5G4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA9Q9Y5G4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PCDHGA9Q9Y5G4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PCDHGA9Q9Y5G4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGA9Q9Y5G4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA9Q9Y5G4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA9Q9Y5G4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDHGA9Q9Y5G4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHGA9Q9Y5G4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHGA9Q9Y5G4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHGA9Q9Y5G4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHGA9Q9Y5G4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHGA9Q9Y5G4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PCDHGA9Q9Y5G4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA9Q9Y5G4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHGA9Q9Y5G4 MIR3621-201ENST00000580529 85 ntBASIC21.92■■□□□ 1.1
PCDHGA9Q9Y5G4 MIR6724-1-201ENST00000616420 92 ntBASIC21.92■■□□□ 1.1
PCDHGA9Q9Y5G4 MIR6724-2-201ENST00000616483 92 ntBASIC21.92■■□□□ 1.1
PCDHGA9Q9Y5G4 MIR6724-4-201ENST00000617390 92 ntBASIC21.92■■□□□ 1.1
PCDHGA9Q9Y5G4 MIR6724-3-201ENST00000622482 92 ntBASIC21.92■■□□□ 1.1
PCDHGA9Q9Y5G4 AL117332.1-201ENST00000622628 974 ntBASIC21.92■■□□□ 1.1
PCDHGA9Q9Y5G4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA9Q9Y5G4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA9Q9Y5G4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA9Q9Y5G4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA9Q9Y5G4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA9Q9Y5G4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA9Q9Y5G4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHGA9Q9Y5G4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHGA9Q9Y5G4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHGA9Q9Y5G4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA9Q9Y5G4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA9Q9Y5G4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHGA9Q9Y5G4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA9Q9Y5G4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHGA9Q9Y5G4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA9Q9Y5G4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.9■■□□□ 1.1
PCDHGA9Q9Y5G4 AL136116.3-201ENST00000402907 1138 ntBASIC21.9■■□□□ 1.1
PCDHGA9Q9Y5G4 MTDHP2-201ENST00000601468 714 ntBASIC21.9■■□□□ 1.1
PCDHGA9Q9Y5G4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA9Q9Y5G4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PCDHGA9Q9Y5G4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PCDHGA9Q9Y5G4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PCDHGA9Q9Y5G4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PCDHGA9Q9Y5G4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDHGA9Q9Y5G4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA9Q9Y5G4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDHGA9Q9Y5G4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDHGA9Q9Y5G4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHGA9Q9Y5G4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA9Q9Y5G4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA9Q9Y5G4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PCDHGA9Q9Y5G4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
PCDHGA9Q9Y5G4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGA9Q9Y5G4 AL356740.2-201ENST00000601559 647 ntBASIC21.88■■□□□ 1.09
PCDHGA9Q9Y5G4 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDHGA9Q9Y5G4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA9Q9Y5G4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA9Q9Y5G4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PCDHGA9Q9Y5G4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PCDHGA9Q9Y5G4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA9Q9Y5G4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA9Q9Y5G4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA9Q9Y5G4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA9Q9Y5G4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PCDHGA9Q9Y5G4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
PCDHGA9Q9Y5G4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA9Q9Y5G4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHGA9Q9Y5G4 AC020928.2-201ENST00000588717 2197 ntBASIC21.87■■□□□ 1.09
PCDHGA9Q9Y5G4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PCDHGA9Q9Y5G4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA9Q9Y5G4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHGA9Q9Y5G4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHGA9Q9Y5G4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA9Q9Y5G4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA9Q9Y5G4 AP004609.3-201ENST00000610705 1884 ntBASIC21.86■■□□□ 1.09
PCDHGA9Q9Y5G4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHGA9Q9Y5G4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHGA9Q9Y5G4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PCDHGA9Q9Y5G4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PCDHGA9Q9Y5G4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA9Q9Y5G4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
PCDHGA9Q9Y5G4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHGA9Q9Y5G4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.85■■□□□ 1.09
PCDHGA9Q9Y5G4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHGA9Q9Y5G4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHGA9Q9Y5G4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms