Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHGC4Q9Y5F7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGC4Q9Y5F7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
PCDHGC4Q9Y5F7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGC4Q9Y5F7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHGC4Q9Y5F7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGC4Q9Y5F7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGC4Q9Y5F7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGC4Q9Y5F7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGC4Q9Y5F7 AC103724.3-201ENST00000564481 992 ntBASIC23.76■■□□□ 1.39
PCDHGC4Q9Y5F7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDHGC4Q9Y5F7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHGC4Q9Y5F7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGC4Q9Y5F7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PCDHGC4Q9Y5F7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGC4Q9Y5F7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGC4Q9Y5F7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDHGC4Q9Y5F7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.75■■□□□ 1.39
PCDHGC4Q9Y5F7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PCDHGC4Q9Y5F7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGC4Q9Y5F7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGC4Q9Y5F7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGC4Q9Y5F7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHGC4Q9Y5F7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGC4Q9Y5F7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PCDHGC4Q9Y5F7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHGC4Q9Y5F7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHGC4Q9Y5F7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGC4Q9Y5F7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGC4Q9Y5F7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGC4Q9Y5F7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGC4Q9Y5F7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.73■■□□□ 1.39
PCDHGC4Q9Y5F7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGC4Q9Y5F7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
PCDHGC4Q9Y5F7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGC4Q9Y5F7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGC4Q9Y5F7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
PCDHGC4Q9Y5F7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
PCDHGC4Q9Y5F7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGC4Q9Y5F7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGC4Q9Y5F7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGC4Q9Y5F7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGC4Q9Y5F7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHGC4Q9Y5F7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHGC4Q9Y5F7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGC4Q9Y5F7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGC4Q9Y5F7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGC4Q9Y5F7 AC120024.1-201ENST00000562672 995 ntBASIC23.71■■□□□ 1.39
PCDHGC4Q9Y5F7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGC4Q9Y5F7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGC4Q9Y5F7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHGC4Q9Y5F7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGC4Q9Y5F7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGC4Q9Y5F7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGC4Q9Y5F7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDHGC4Q9Y5F7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PCDHGC4Q9Y5F7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PCDHGC4Q9Y5F7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGC4Q9Y5F7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGC4Q9Y5F7 KRT18P24-201ENST00000344739 1156 ntBASIC23.69■■□□□ 1.38
PCDHGC4Q9Y5F7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.69■■□□□ 1.38
PCDHGC4Q9Y5F7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHGC4Q9Y5F7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHGC4Q9Y5F7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHGC4Q9Y5F7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGC4Q9Y5F7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGC4Q9Y5F7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.68■■□□□ 1.38
PCDHGC4Q9Y5F7 THA1P-201ENST00000590384 1145 ntBASIC23.68■■□□□ 1.38
PCDHGC4Q9Y5F7 AL031848.2-201ENST00000607670 837 ntBASIC23.68■■□□□ 1.38
PCDHGC4Q9Y5F7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PCDHGC4Q9Y5F7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PCDHGC4Q9Y5F7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.67■■□□□ 1.38
PCDHGC4Q9Y5F7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGC4Q9Y5F7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGC4Q9Y5F7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDHGC4Q9Y5F7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGC4Q9Y5F7 AC090877.2-201ENST00000558441 1738 ntBASIC23.67■■□□□ 1.38
PCDHGC4Q9Y5F7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDHGC4Q9Y5F7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.66■■□□□ 1.38
PCDHGC4Q9Y5F7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGC4Q9Y5F7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGC4Q9Y5F7 AC138932.3-201ENST00000567634 1902 ntBASIC23.65■■□□□ 1.38
PCDHGC4Q9Y5F7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGC4Q9Y5F7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGC4Q9Y5F7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGC4Q9Y5F7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGC4Q9Y5F7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGC4Q9Y5F7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHGC4Q9Y5F7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGC4Q9Y5F7 AL451085.2-201ENST00000605085 799 ntBASIC23.64■■□□□ 1.37
PCDHGC4Q9Y5F7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGC4Q9Y5F7 AC142381.3-201ENST00000568208 1670 ntBASIC23.64■■□□□ 1.37
PCDHGC4Q9Y5F7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGC4Q9Y5F7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHGC4Q9Y5F7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGC4Q9Y5F7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGC4Q9Y5F7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGC4Q9Y5F7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHGC4Q9Y5F7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGC4Q9Y5F7 AC011551.1-201ENST00000614101 683 ntBASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms