Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
KCNIP3Q9Y2W7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
KCNIP3Q9Y2W7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
KCNIP3Q9Y2W7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.5■□□□□ 0.71
KCNIP3Q9Y2W7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.5■□□□□ 0.71
KCNIP3Q9Y2W7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.5■□□□□ 0.71
KCNIP3Q9Y2W7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KCNIP3Q9Y2W7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KCNIP3Q9Y2W7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KCNIP3Q9Y2W7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KCNIP3Q9Y2W7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KCNIP3Q9Y2W7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
KCNIP3Q9Y2W7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.49■□□□□ 0.71
KCNIP3Q9Y2W7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.49■□□□□ 0.71
KCNIP3Q9Y2W7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.49■□□□□ 0.71
KCNIP3Q9Y2W7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KCNIP3Q9Y2W7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KCNIP3Q9Y2W7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNIP3Q9Y2W7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
KCNIP3Q9Y2W7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNIP3Q9Y2W7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.47■□□□□ 0.71
KCNIP3Q9Y2W7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.47■□□□□ 0.71
KCNIP3Q9Y2W7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNIP3Q9Y2W7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNIP3Q9Y2W7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCNIP3Q9Y2W7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCNIP3Q9Y2W7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KCNIP3Q9Y2W7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCNIP3Q9Y2W7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCNIP3Q9Y2W7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCNIP3Q9Y2W7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.46■□□□□ 0.71
KCNIP3Q9Y2W7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KCNIP3Q9Y2W7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KCNIP3Q9Y2W7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.46■□□□□ 0.71
KCNIP3Q9Y2W7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCNIP3Q9Y2W7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.45■□□□□ 0.7
KCNIP3Q9Y2W7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KCNIP3Q9Y2W7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KCNIP3Q9Y2W7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KCNIP3Q9Y2W7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.45■□□□□ 0.7
KCNIP3Q9Y2W7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 AC004812.2-201ENST00000611079 2094 ntBASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 AL162393.1-201ENST00000437852 946 ntBASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 DUX4L13-201ENST00000554103 1267 ntBASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 DUX4L15-201ENST00000611059 1267 ntBASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 DUX4L23-201ENST00000615195 1269 ntBASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 DUX4L24-201ENST00000617576 1269 ntBASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 LINC01971-201ENST00000617888 1048 ntBASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 DUX4L22-201ENST00000618238 1269 ntBASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 DUX4L20-201ENST00000619712 1269 ntBASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 DUX4L21-201ENST00000622058 1269 ntBASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 DUX4L10-201ENST00000622460 1267 ntBASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 DUX4L25-201ENST00000624915 1269 ntBASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCNIP3Q9Y2W7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.43■□□□□ 0.7
KCNIP3Q9Y2W7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNIP3Q9Y2W7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KCNIP3Q9Y2W7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.43■□□□□ 0.7
KCNIP3Q9Y2W7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.43■□□□□ 0.7
KCNIP3Q9Y2W7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KCNIP3Q9Y2W7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNIP3Q9Y2W7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNIP3Q9Y2W7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KCNIP3Q9Y2W7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNIP3Q9Y2W7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
KCNIP3Q9Y2W7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNIP3Q9Y2W7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.42■□□□□ 0.7
KCNIP3Q9Y2W7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.42■□□□□ 0.7
KCNIP3Q9Y2W7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KCNIP3Q9Y2W7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.42■□□□□ 0.7
KCNIP3Q9Y2W7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNIP3Q9Y2W7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNIP3Q9Y2W7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNIP3Q9Y2W7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms