Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 RAB11FIP3-203ENST00000434585 3550 ntAPPRIS ALT2 TSL 513.66□□□□□ -0.227e-6■■■□□ 18.9
DDX52Q9Y2R4 AGO2-209ENST00000523609 3050 ntTSL 1 (best)13.24□□□□□ -0.297e-6■■■□□ 18.9
DDX52Q9Y2R4 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC12.99□□□□□ -0.337e-6■■■□□ 18.9
DDX52Q9Y2R4 AC008760.2-201ENST00000614781 1357 ntBASIC12.61□□□□□ -0.397e-6■■■□□ 18.9
DDX52Q9Y2R4 RAB11FIP3-211ENST00000495663 529 ntTSL 211.94□□□□□ -0.57e-6■■■□□ 18.9
DDX52Q9Y2R4 EHMT1-249ENST00000637949 575 ntTSL 510.57□□□□□ -0.727e-6■■■□□ 18.9
DDX52Q9Y2R4 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.847e-6■■■□□ 18.9
DDX52Q9Y2R4 AC011476.3-201ENST00000593060 786 ntTSL 5 BASIC9.7□□□□□ -0.867e-6■■■□□ 18.9
DDX52Q9Y2R4 TCTEX1D2-202ENST00000426563 603 ntTSL 29.21□□□□□ -0.947e-6■■■□□ 18.9
DDX52Q9Y2R4 ZNF217-203ENST00000431687 779 ntTSL 58.51□□□□□ -1.057e-6■■■□□ 18.9
DDX52Q9Y2R4 ZNF217-205ENST00000540425 568 ntTSL 38.38□□□□□ -1.077e-6■■■□□ 18.9
DDX52Q9Y2R4 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC8.36□□□□□ -1.077e-6■■■□□ 18.9
DDX52Q9Y2R4 AGO2-202ENST00000517293 422 ntTSL 37.39□□□□□ -1.237e-6■■■□□ 18.9
DDX52Q9Y2R4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.24□□□□□ -1.257e-6■■■□□ 18.9
DDX52Q9Y2R4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.427e-6■■■□□ 18.9
DDX52Q9Y2R4 TCF3-208ENST00000586318 631 ntTSL 319.77■□□□□ 0.764e-6■■■□□ 18.9
DDX52Q9Y2R4 ANP32A-208ENST00000495420 707 ntTSL 220.31■□□□□ 0.841e-9■■■□□ 18.9
DDX52Q9Y2R4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.551e-9■■■□□ 18.9
DDX52Q9Y2R4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.341e-9■■■□□ 18.9
DDX52Q9Y2R4 ANP32A-202ENST00000409628 2001 ntTSL 515.61■□□□□ 0.091e-9■■■□□ 18.9
DDX52Q9Y2R4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.93■■□□□ 1.97e-9■■■□□ 18.9
DDX52Q9Y2R4 HFM1-204ENST00000448819 540 ntTSL 511.12□□□□□ -0.633e-13■■■□□ 18.8
DDX52Q9Y2R4 HFM1-202ENST00000427444 672 ntTSL 54.95□□□□□ -1.623e-13■■■□□ 18.8
DDX52Q9Y2R4 HFM1-208ENST00000488023 1699 ntTSL 53.63□□□□□ -1.833e-13■■■□□ 18.8
DDX52Q9Y2R4 HFM1-207ENST00000481900 2020 ntTSL 53.36□□□□□ -1.873e-13■■■□□ 18.8
DDX52Q9Y2R4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.163e-13■■■□□ 18.8
DDX52Q9Y2R4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.06■□□□□ 0.644e-6■■■□□ 18.8
DDX52Q9Y2R4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.74■□□□□ 0.594e-6■■■□□ 18.8
DDX52Q9Y2R4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.554e-6■■■□□ 18.8
DDX52Q9Y2R4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.514e-6■■■□□ 18.8
DDX52Q9Y2R4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.77■□□□□ 0.434e-6■■■□□ 18.8
DDX52Q9Y2R4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.77■□□□□ 0.434e-6■■■□□ 18.8
DDX52Q9Y2R4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.62■□□□□ 0.414e-6■■■□□ 18.8
DDX52Q9Y2R4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.274e-6■■■□□ 18.8
DDX52Q9Y2R4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.37■□□□□ 0.214e-6■■■□□ 18.8
DDX52Q9Y2R4 UNKL-214ENST00000515195 481 ntTSL 417.78■□□□□ 0.447e-7■■■□□ 18.7
DDX52Q9Y2R4 UNKL-213ENST00000513783 582 ntTSL 417■□□□□ 0.317e-7■■■□□ 18.7
DDX52Q9Y2R4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.31■■□□□ 1.326e-7■■■□□ 18.7
DDX52Q9Y2R4 UNKL-206ENST00000402641 669 ntTSL 322.01■■□□□ 1.116e-7■■■□□ 18.7
DDX52Q9Y2R4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.646e-7■■■□□ 18.7
DDX52Q9Y2R4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.72■□□□□ 0.276e-7■■■□□ 18.7
DDX52Q9Y2R4 UNKL-210ENST00000508903 3430 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.136e-7■■■□□ 18.7
DDX52Q9Y2R4 UNKL-207ENST00000403703 4281 ntTSL 1 (best)13.88□□□□□ -0.196e-7■■■□□ 18.7
DDX52Q9Y2R4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.15■■□□□ 1.943e-6■■■□□ 18.7
DDX52Q9Y2R4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.91■■□□□ 1.263e-6■■■□□ 18.7
DDX52Q9Y2R4 GPX4-205ENST00000587932 274 ntTSL 233.67■■■□□ 2.988e-6■■■□□ 18.6
DDX52Q9Y2R4 MKNK2-210ENST00000589534 454 ntTSL 232.05■■■□□ 2.728e-6■■■□□ 18.6
DDX52Q9Y2R4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.538e-6■■■□□ 18.6
DDX52Q9Y2R4 FZR1-206ENST00000588327 675 ntTSL 328.68■■■□□ 2.183e-8■■■□□ 18.6
DDX52Q9Y2R4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.188e-6■■■□□ 18.6
DDX52Q9Y2R4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.188e-6■■■□□ 18.6
DDX52Q9Y2R4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.93■■□□□ 1.98e-6■■■□□ 18.6
DDX52Q9Y2R4 GPX4-208ENST00000592940 1184 ntTSL 526.71■■□□□ 1.878e-6■■■□□ 18.6
DDX52Q9Y2R4 MAFG-203ENST00000574686 570 ntTSL 526.64■■□□□ 1.864e-6■■■□□ 18.6
DDX52Q9Y2R4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.55■■□□□ 1.528e-6■■■□□ 18.6
DDX52Q9Y2R4 SELENOO-202ENST00000492092 1626 ntTSL 1 (best)23.82■■□□□ 1.48e-6■■■□□ 18.6
DDX52Q9Y2R4 MKNK2-205ENST00000586828 1503 ntTSL 223.48■■□□□ 1.358e-6■■■□□ 18.6
DDX52Q9Y2R4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.338e-6■■■□□ 18.6
DDX52Q9Y2R4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.128e-6■■■□□ 18.6
DDX52Q9Y2R4 SREBF1-206ENST00000423161 1058 ntTSL 321.94■■□□□ 1.18e-6■■■□□ 18.6
DDX52Q9Y2R4 LRCH4-205ENST00000485554 774 ntTSL 321.06■□□□□ 0.963e-8■■■□□ 18.6
DDX52Q9Y2R4 LASP1-209ENST00000585841 1408 ntTSL 221.03■□□□□ 0.968e-6■■■□□ 18.6
DDX52Q9Y2R4 SREBF1-211ENST00000476994 591 ntTSL 220.93■□□□□ 0.948e-6■■■□□ 18.6
DDX52Q9Y2R4 THUMPD3-AS1-209ENST00000518437 240 ntTSL 220.75■□□□□ 0.918e-6■■■□□ 18.6
DDX52Q9Y2R4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.858e-6■■■□□ 18.6
DDX52Q9Y2R4 PLXNB2-202ENST00000411680 704 ntTSL 220.28■□□□□ 0.848e-6■■■□□ 18.6
DDX52Q9Y2R4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.828e-6■■■□□ 18.6
DDX52Q9Y2R4 IQSEC1-202ENST00000473088 545 ntTSL 420.01■□□□□ 0.798e-6■■■□□ 18.6
DDX52Q9Y2R4 PLXNB2-212ENST00000496720 913 ntTSL 319.91■□□□□ 0.788e-6■■■□□ 18.6
DDX52Q9Y2R4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.58■□□□□ 0.738e-6■■■□□ 18.6
DDX52Q9Y2R4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.56■□□□□ 0.728e-6■■■□□ 18.6
DDX52Q9Y2R4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.643e-8■■■□□ 18.6
DDX52Q9Y2R4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.68■□□□□ 0.588e-6■■■□□ 18.6
DDX52Q9Y2R4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.518e-6■■■□□ 18.6
DDX52Q9Y2R4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.478e-6■■■□□ 18.6
DDX52Q9Y2R4 SREBF1-222ENST00000583732 580 ntTSL 417.96■□□□□ 0.478e-6■■■□□ 18.6
DDX52Q9Y2R4 GPX4-203ENST00000585480 501 ntTSL 217.84■□□□□ 0.458e-6■■■□□ 18.6
DDX52Q9Y2R4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.8■□□□□ 0.448e-6■■■□□ 18.6
DDX52Q9Y2R4 RPS6KA3-202ENST00000438357 530 ntTSL 517.64■□□□□ 0.418e-6■■■□□ 18.6
DDX52Q9Y2R4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.398e-6■■■□□ 18.6
DDX52Q9Y2R4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.17■□□□□ 0.348e-6■■■□□ 18.6
DDX52Q9Y2R4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.318e-6■■■□□ 18.6
DDX52Q9Y2R4 TSNARE1-203ENST00000518928 940 ntTSL 316.84■□□□□ 0.298e-6■■■□□ 18.6
DDX52Q9Y2R4 IGF1R-210ENST00000559925 2280 ntTSL 1 (best)16.81■□□□□ 0.288e-6■■■□□ 18.6
DDX52Q9Y2R4 ROR2-205ENST00000495386 664 ntTSL 316.66■□□□□ 0.268e-6■■■□□ 18.6
DDX52Q9Y2R4 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC16■□□□□ 0.158e-6■■■□□ 18.6
DDX52Q9Y2R4 PLXNB2-206ENST00000434732 253 ntTSL 215.88■□□□□ 0.138e-6■■■□□ 18.6
DDX52Q9Y2R4 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.118e-6■■■□□ 18.6
DDX52Q9Y2R4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.18e-6■■■□□ 18.6
DDX52Q9Y2R4 ROR2-206ENST00000546883 501 ntTSL 315.62■□□□□ 0.098e-6■■■□□ 18.6
DDX52Q9Y2R4 TLN1-207ENST00000489255 798 ntTSL 215.54■□□□□ 0.088e-6■■■□□ 18.6
DDX52Q9Y2R4 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -08e-6■■■□□ 18.6
DDX52Q9Y2R4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.048e-6■■■□□ 18.6
DDX52Q9Y2R4 MKNK2-209ENST00000589509 352 ntTSL 514.37□□□□□ -0.118e-6■■■□□ 18.6
DDX52Q9Y2R4 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.148e-6■■■□□ 18.6
DDX52Q9Y2R4 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC13.95□□□□□ -0.183e-6■■■□□ 18.6
DDX52Q9Y2R4 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.218e-6■■■□□ 18.6
DDX52Q9Y2R4 THUMPD3-AS1-203ENST00000469846 670 ntTSL 313.39□□□□□ -0.278e-6■■■□□ 18.6
DDX52Q9Y2R4 SLC1A5-204ENST00000593713 774 ntTSL 313.38□□□□□ -0.278e-6■■■□□ 18.6
DDX52Q9Y2R4 MKNK2-213ENST00000591601 3582 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.348e-6■■■□□ 18.6
Retrieved 100 of 4,483 protein–RNA pairs in 73.7 ms