Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRCH1Q9Y2L9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.23■■□□□ 1.15
LRCH1Q9Y2L9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRCH1Q9Y2L9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LRCH1Q9Y2L9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
LRCH1Q9Y2L9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LRCH1Q9Y2L9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LRCH1Q9Y2L9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LRCH1Q9Y2L9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.22■■□□□ 1.15
LRCH1Q9Y2L9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LRCH1Q9Y2L9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.21■■□□□ 1.15
LRCH1Q9Y2L9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
LRCH1Q9Y2L9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
LRCH1Q9Y2L9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.21■■□□□ 1.15
LRCH1Q9Y2L9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
LRCH1Q9Y2L9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.21■■□□□ 1.15
LRCH1Q9Y2L9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LRCH1Q9Y2L9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
LRCH1Q9Y2L9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.21■■□□□ 1.15
LRCH1Q9Y2L9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
LRCH1Q9Y2L9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
LRCH1Q9Y2L9 AC127496.7-201ENST00000625110 1798 ntBASIC22.2■■□□□ 1.14
LRCH1Q9Y2L9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LRCH1Q9Y2L9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LRCH1Q9Y2L9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
LRCH1Q9Y2L9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LRCH1Q9Y2L9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.19■■□□□ 1.14
LRCH1Q9Y2L9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LRCH1Q9Y2L9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LRCH1Q9Y2L9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.19■■□□□ 1.14
LRCH1Q9Y2L9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.19■■□□□ 1.14
LRCH1Q9Y2L9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LRCH1Q9Y2L9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
LRCH1Q9Y2L9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LRCH1Q9Y2L9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LRCH1Q9Y2L9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
LRCH1Q9Y2L9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LRCH1Q9Y2L9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LRCH1Q9Y2L9 AC007375.3-201ENST00000600936 2314 ntBASIC22.18■■□□□ 1.14
LRCH1Q9Y2L9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LRCH1Q9Y2L9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.18■■□□□ 1.14
LRCH1Q9Y2L9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
LRCH1Q9Y2L9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.17■■□□□ 1.14
LRCH1Q9Y2L9 LINC00526-201ENST00000581067 1875 ntBASIC22.17■■□□□ 1.14
LRCH1Q9Y2L9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
LRCH1Q9Y2L9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRCH1Q9Y2L9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.17■■□□□ 1.14
LRCH1Q9Y2L9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRCH1Q9Y2L9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRCH1Q9Y2L9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRCH1Q9Y2L9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRCH1Q9Y2L9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.17■■□□□ 1.14
LRCH1Q9Y2L9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LRCH1Q9Y2L9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRCH1Q9Y2L9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.16■■□□□ 1.14
LRCH1Q9Y2L9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.16■■□□□ 1.14
LRCH1Q9Y2L9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
LRCH1Q9Y2L9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRCH1Q9Y2L9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
LRCH1Q9Y2L9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.15■■□□□ 1.14
LRCH1Q9Y2L9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.15■■□□□ 1.14
LRCH1Q9Y2L9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRCH1Q9Y2L9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.15■■□□□ 1.14
LRCH1Q9Y2L9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRCH1Q9Y2L9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.15■■□□□ 1.14
LRCH1Q9Y2L9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRCH1Q9Y2L9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
LRCH1Q9Y2L9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
LRCH1Q9Y2L9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.15■■□□□ 1.14
LRCH1Q9Y2L9 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
LRCH1Q9Y2L9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRCH1Q9Y2L9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.15■■□□□ 1.14
LRCH1Q9Y2L9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRCH1Q9Y2L9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
LRCH1Q9Y2L9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
LRCH1Q9Y2L9 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.14■■□□□ 1.13
LRCH1Q9Y2L9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
LRCH1Q9Y2L9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRCH1Q9Y2L9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRCH1Q9Y2L9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRCH1Q9Y2L9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRCH1Q9Y2L9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRCH1Q9Y2L9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
LRCH1Q9Y2L9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRCH1Q9Y2L9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRCH1Q9Y2L9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRCH1Q9Y2L9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LRCH1Q9Y2L9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.13■■□□□ 1.13
LRCH1Q9Y2L9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRCH1Q9Y2L9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRCH1Q9Y2L9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.13■■□□□ 1.13
LRCH1Q9Y2L9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.12■■□□□ 1.13
LRCH1Q9Y2L9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRCH1Q9Y2L9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LRCH1Q9Y2L9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
LRCH1Q9Y2L9 SLC6A10P-202ENST00000431994 2058 ntBASIC22.12■■□□□ 1.13
LRCH1Q9Y2L9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.12■■□□□ 1.13
LRCH1Q9Y2L9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
LRCH1Q9Y2L9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRCH1Q9Y2L9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms