Protein–RNA interactions for Protein: Q9H4Q3

PRDM13, PR domain zinc finger protein 13, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13Q9H4Q3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
PRDM13Q9H4Q3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRDM13Q9H4Q3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.33■□□□□ 0.68
PRDM13Q9H4Q3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.33■□□□□ 0.68
PRDM13Q9H4Q3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRDM13Q9H4Q3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRDM13Q9H4Q3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRDM13Q9H4Q3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.32■□□□□ 0.68
PRDM13Q9H4Q3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRDM13Q9H4Q3 KRT18P24-201ENST00000344739 1156 ntBASIC19.32■□□□□ 0.68
PRDM13Q9H4Q3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRDM13Q9H4Q3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.32■□□□□ 0.68
PRDM13Q9H4Q3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.32■□□□□ 0.68
PRDM13Q9H4Q3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRDM13Q9H4Q3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRDM13Q9H4Q3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRDM13Q9H4Q3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRDM13Q9H4Q3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRDM13Q9H4Q3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRDM13Q9H4Q3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
PRDM13Q9H4Q3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRDM13Q9H4Q3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRDM13Q9H4Q3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRDM13Q9H4Q3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
PRDM13Q9H4Q3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRDM13Q9H4Q3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRDM13Q9H4Q3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRDM13Q9H4Q3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRDM13Q9H4Q3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.3■□□□□ 0.68
PRDM13Q9H4Q3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRDM13Q9H4Q3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.3■□□□□ 0.68
PRDM13Q9H4Q3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PRDM13Q9H4Q3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRDM13Q9H4Q3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRDM13Q9H4Q3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRDM13Q9H4Q3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRDM13Q9H4Q3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRDM13Q9H4Q3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.3■□□□□ 0.68
PRDM13Q9H4Q3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM13Q9H4Q3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PRDM13Q9H4Q3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM13Q9H4Q3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM13Q9H4Q3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRDM13Q9H4Q3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.29■□□□□ 0.68
PRDM13Q9H4Q3 AP004609.3-201ENST00000610705 1884 ntBASIC19.28■□□□□ 0.68
PRDM13Q9H4Q3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM13Q9H4Q3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM13Q9H4Q3 AC079834.2-201ENST00000609776 1949 ntBASIC19.28■□□□□ 0.68
PRDM13Q9H4Q3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRDM13Q9H4Q3 AC239859.2-201ENST00000444165 318 ntBASIC19.28■□□□□ 0.68
PRDM13Q9H4Q3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.28■□□□□ 0.68
PRDM13Q9H4Q3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.28■□□□□ 0.68
PRDM13Q9H4Q3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
PRDM13Q9H4Q3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.28■□□□□ 0.68
PRDM13Q9H4Q3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.28■□□□□ 0.68
PRDM13Q9H4Q3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PRDM13Q9H4Q3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRDM13Q9H4Q3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRDM13Q9H4Q3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.27■□□□□ 0.68
PRDM13Q9H4Q3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRDM13Q9H4Q3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
PRDM13Q9H4Q3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM13Q9H4Q3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM13Q9H4Q3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM13Q9H4Q3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.26■□□□□ 0.67
PRDM13Q9H4Q3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM13Q9H4Q3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRDM13Q9H4Q3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM13Q9H4Q3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM13Q9H4Q3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM13Q9H4Q3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM13Q9H4Q3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM13Q9H4Q3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM13Q9H4Q3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PRDM13Q9H4Q3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PRDM13Q9H4Q3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PRDM13Q9H4Q3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM13Q9H4Q3 AL592295.1-201ENST00000400984 884 ntBASIC19.24■□□□□ 0.67
PRDM13Q9H4Q3 AL356441.2-201ENST00000443009 864 ntBASIC19.24■□□□□ 0.67
PRDM13Q9H4Q3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PRDM13Q9H4Q3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM13Q9H4Q3 THA1P-201ENST00000590384 1145 ntBASIC19.24■□□□□ 0.67
PRDM13Q9H4Q3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM13Q9H4Q3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRDM13Q9H4Q3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.23■□□□□ 0.67
PRDM13Q9H4Q3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.23■□□□□ 0.67
PRDM13Q9H4Q3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PRDM13Q9H4Q3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRDM13Q9H4Q3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRDM13Q9H4Q3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRDM13Q9H4Q3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PRDM13Q9H4Q3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.23■□□□□ 0.67
PRDM13Q9H4Q3 AC137630.3-201ENST00000607245 391 ntBASIC19.23■□□□□ 0.67
PRDM13Q9H4Q3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PRDM13Q9H4Q3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRDM13Q9H4Q3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRDM13Q9H4Q3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.22■□□□□ 0.67
PRDM13Q9H4Q3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM13Q9H4Q3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.22■□□□□ 0.67
PRDM13Q9H4Q3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms