Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-1Q9BYR8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-1Q9BYR8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-1Q9BYR8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 NFE2L3P1-201ENST00000588207 1959 ntBASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 HLA-L-211ENST00000482052 1765 ntBASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-1Q9BYR8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 AC126177.7-201ENST00000547904 679 ntBASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 CR559946.2-201ENST00000623684 991 ntBASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-1Q9BYR8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC11.9□□□□□ -0.51
KRTAP3-1Q9BYR8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 ZNRF2P2-203ENST00000454624 420 ntBASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 AL157400.5-201ENST00000507624 621 ntBASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 AC025884.2-201ENST00000553429 711 ntBASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP3-1Q9BYR8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-1Q9BYR8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KRTAP3-1Q9BYR8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KRTAP3-1Q9BYR8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
KRTAP3-1Q9BYR8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KRTAP3-1Q9BYR8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
KRTAP3-1Q9BYR8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC11.87□□□□□ -0.51
KRTAP3-1Q9BYR8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KRTAP3-1Q9BYR8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
KRTAP3-1Q9BYR8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC11.87□□□□□ -0.51
KRTAP3-1Q9BYR8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KRTAP3-1Q9BYR8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
KRTAP3-1Q9BYR8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-1Q9BYR8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-1Q9BYR8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC11.86□□□□□ -0.51
KRTAP3-1Q9BYR8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC11.86□□□□□ -0.51
KRTAP3-1Q9BYR8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms