Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LCE3DQ9BYE3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 AC108673.1-201ENST00000510422 1159 ntBASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 RARRES2P7-201ENST00000567349 469 ntBASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 SETD8P1-201ENST00000623146 1180 ntBASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LCE3DQ9BYE3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 AL391121.1-201ENST00000607967 1349 ntBASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
LCE3DQ9BYE3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC6.28□□□□□ -1.4
LCE3DQ9BYE3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms