Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEC22CQ9BRL7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEC22CQ9BRL7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SEC22CQ9BRL7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SEC22CQ9BRL7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEC22CQ9BRL7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
SEC22CQ9BRL7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SEC22CQ9BRL7 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.77■□□□□ 0.76
SEC22CQ9BRL7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SEC22CQ9BRL7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEC22CQ9BRL7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
SEC22CQ9BRL7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEC22CQ9BRL7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEC22CQ9BRL7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEC22CQ9BRL7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEC22CQ9BRL7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEC22CQ9BRL7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.76■□□□□ 0.75
SEC22CQ9BRL7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.76■□□□□ 0.75
SEC22CQ9BRL7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEC22CQ9BRL7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.75■□□□□ 0.75
SEC22CQ9BRL7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SEC22CQ9BRL7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.75■□□□□ 0.75
SEC22CQ9BRL7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEC22CQ9BRL7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEC22CQ9BRL7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SEC22CQ9BRL7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEC22CQ9BRL7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEC22CQ9BRL7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.75■□□□□ 0.75
SEC22CQ9BRL7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEC22CQ9BRL7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEC22CQ9BRL7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SEC22CQ9BRL7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEC22CQ9BRL7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.75■□□□□ 0.75
SEC22CQ9BRL7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SEC22CQ9BRL7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEC22CQ9BRL7 AL024507.2-201ENST00000606070 2574 ntBASIC19.74■□□□□ 0.75
SEC22CQ9BRL7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEC22CQ9BRL7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.74■□□□□ 0.75
SEC22CQ9BRL7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SEC22CQ9BRL7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SEC22CQ9BRL7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEC22CQ9BRL7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEC22CQ9BRL7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SEC22CQ9BRL7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEC22CQ9BRL7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SEC22CQ9BRL7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.73■□□□□ 0.75
SEC22CQ9BRL7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SEC22CQ9BRL7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SEC22CQ9BRL7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SEC22CQ9BRL7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEC22CQ9BRL7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.72■□□□□ 0.75
SEC22CQ9BRL7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEC22CQ9BRL7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.72■□□□□ 0.75
SEC22CQ9BRL7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEC22CQ9BRL7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.72■□□□□ 0.75
SEC22CQ9BRL7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.72■□□□□ 0.75
SEC22CQ9BRL7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.72■□□□□ 0.75
SEC22CQ9BRL7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEC22CQ9BRL7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEC22CQ9BRL7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
SEC22CQ9BRL7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.71■□□□□ 0.75
SEC22CQ9BRL7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.71■□□□□ 0.75
SEC22CQ9BRL7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SEC22CQ9BRL7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEC22CQ9BRL7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEC22CQ9BRL7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SEC22CQ9BRL7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SEC22CQ9BRL7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SEC22CQ9BRL7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.71■□□□□ 0.75
SEC22CQ9BRL7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEC22CQ9BRL7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SEC22CQ9BRL7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SEC22CQ9BRL7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SEC22CQ9BRL7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.7■□□□□ 0.74
SEC22CQ9BRL7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.7■□□□□ 0.74
SEC22CQ9BRL7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
SEC22CQ9BRL7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
SEC22CQ9BRL7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.7■□□□□ 0.74
SEC22CQ9BRL7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.7■□□□□ 0.74
SEC22CQ9BRL7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEC22CQ9BRL7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEC22CQ9BRL7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.7■□□□□ 0.74
SEC22CQ9BRL7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEC22CQ9BRL7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEC22CQ9BRL7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SEC22CQ9BRL7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SEC22CQ9BRL7 AC005559.1-201ENST00000589661 871 ntBASIC19.69■□□□□ 0.74
SEC22CQ9BRL7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SEC22CQ9BRL7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEC22CQ9BRL7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SEC22CQ9BRL7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.69■□□□□ 0.74
SEC22CQ9BRL7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SEC22CQ9BRL7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEC22CQ9BRL7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SEC22CQ9BRL7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEC22CQ9BRL7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SEC22CQ9BRL7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEC22CQ9BRL7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEC22CQ9BRL7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEC22CQ9BRL7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms