Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
ABCA3Q99758 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC31.94■■■□□ 2.7
ABCA3Q99758 MIR6821-201ENST00000617625 74 ntBASIC31.94■■■□□ 2.7
ABCA3Q99758 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA3Q99758 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA3Q99758 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC31.93■■■□□ 2.7
ABCA3Q99758 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA3Q99758 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA3Q99758 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA3Q99758 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
ABCA3Q99758 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC31.92■■■□□ 2.7
ABCA3Q99758 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
ABCA3Q99758 GRAMD4P4-201ENST00000613563 1115 ntBASIC31.92■■■□□ 2.7
ABCA3Q99758 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ABCA3Q99758 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
ABCA3Q99758 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
ABCA3Q99758 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
ABCA3Q99758 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC31.92■■■□□ 2.7
ABCA3Q99758 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ABCA3Q99758 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC31.91■■■□□ 2.7
ABCA3Q99758 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ABCA3Q99758 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC31.91■■■□□ 2.7
ABCA3Q99758 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
ABCA3Q99758 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC31.9■■■□□ 2.7
ABCA3Q99758 SF1-220ENST00000626028 704 ntTSL 2 BASIC31.9■■■□□ 2.7
ABCA3Q99758 AC097381.1-201ENST00000429019 1296 ntBASIC31.89■■■□□ 2.7
ABCA3Q99758 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
ABCA3Q99758 MIR6722-201ENST00000617286 78 ntBASIC31.89■■■□□ 2.7
ABCA3Q99758 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
ABCA3Q99758 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
ABCA3Q99758 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
ABCA3Q99758 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
ABCA3Q99758 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
ABCA3Q99758 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
ABCA3Q99758 PTMA-205ENST00000410064 814 ntTSL 2 BASIC31.88■■■□□ 2.69
ABCA3Q99758 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC31.88■■■□□ 2.69
ABCA3Q99758 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
ABCA3Q99758 AC087623.3-201ENST00000607047 1098 ntBASIC31.88■■■□□ 2.69
ABCA3Q99758 AL355001.2-201ENST00000620617 1191 ntBASIC31.88■■■□□ 2.69
ABCA3Q99758 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
ABCA3Q99758 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.87■■■□□ 2.69
ABCA3Q99758 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
ABCA3Q99758 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
ABCA3Q99758 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
ABCA3Q99758 AL136967.2-201ENST00000623968 743 ntBASIC31.86■■■□□ 2.69
ABCA3Q99758 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
ABCA3Q99758 AP004609.3-201ENST00000610705 1884 ntBASIC31.86■■■□□ 2.69
ABCA3Q99758 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
ABCA3Q99758 AL162430.1-201ENST00000480705 870 ntBASIC31.86■■■□□ 2.69
ABCA3Q99758 PLD4-205ENST00000553861 667 ntTSL 2 BASIC31.86■■■□□ 2.69
ABCA3Q99758 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
ABCA3Q99758 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
ABCA3Q99758 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
ABCA3Q99758 GATM-206ENST00000558336 1522 ntTSL 2 BASIC31.84■■■□□ 2.69
ABCA3Q99758 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.84■■■□□ 2.69
ABCA3Q99758 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC31.84■■■□□ 2.69
ABCA3Q99758 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.84■■■□□ 2.69
ABCA3Q99758 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
ABCA3Q99758 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC31.84■■■□□ 2.69
ABCA3Q99758 SRD5A1P1-201ENST00000442297 786 ntBASIC31.83■■■□□ 2.69
ABCA3Q99758 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
ABCA3Q99758 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC31.83■■■□□ 2.69
ABCA3Q99758 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ABCA3Q99758 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
ABCA3Q99758 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
ABCA3Q99758 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC31.82■■■□□ 2.68
ABCA3Q99758 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ABCA3Q99758 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ABCA3Q99758 FOXO3B-201ENST00000395675 1928 ntBASIC31.82■■■□□ 2.68
ABCA3Q99758 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ABCA3Q99758 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
ABCA3Q99758 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC31.81■■■□□ 2.68
ABCA3Q99758 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC31.8■■■□□ 2.68
ABCA3Q99758 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC31.8■■■□□ 2.68
ABCA3Q99758 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
ABCA3Q99758 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
ABCA3Q99758 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC31.79■■■□□ 2.68
ABCA3Q99758 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
ABCA3Q99758 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
ABCA3Q99758 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
ABCA3Q99758 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
ABCA3Q99758 HYI-206ENST00000372434 1025 ntTSL 5 BASIC31.78■■■□□ 2.68
ABCA3Q99758 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC31.78■■■□□ 2.68
ABCA3Q99758 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC31.77■■■□□ 2.68
ABCA3Q99758 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC31.77■■■□□ 2.68
ABCA3Q99758 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
ABCA3Q99758 STOX2-205ENST00000513034 807 ntTSL 3 BASIC31.77■■■□□ 2.68
ABCA3Q99758 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
ABCA3Q99758 AC091305.1-201ENST00000479476 895 ntBASIC31.76■■■□□ 2.67
ABCA3Q99758 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
ABCA3Q99758 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA3Q99758 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA3Q99758 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA3Q99758 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA3Q99758 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA3Q99758 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA3Q99758 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA3Q99758 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.75■■■□□ 2.67
ABCA3Q99758 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.75■■■□□ 2.67
ABCA3Q99758 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms