Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.48■■□□□ 1.51
CDK5RAP1Q96SZ6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
CDK5RAP1Q96SZ6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDK5RAP1Q96SZ6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDK5RAP1Q96SZ6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.48■■□□□ 1.51
CDK5RAP1Q96SZ6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CDK5RAP1Q96SZ6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.48■■□□□ 1.51
CDK5RAP1Q96SZ6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
CDK5RAP1Q96SZ6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.47■■□□□ 1.51
CDK5RAP1Q96SZ6 GUSBP5-201ENST00000418136 578 ntBASIC24.47■■□□□ 1.51
CDK5RAP1Q96SZ6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDK5RAP1Q96SZ6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CDK5RAP1Q96SZ6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
CDK5RAP1Q96SZ6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
CDK5RAP1Q96SZ6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.46■■□□□ 1.51
CDK5RAP1Q96SZ6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDK5RAP1Q96SZ6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CDK5RAP1Q96SZ6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
CDK5RAP1Q96SZ6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.45■■□□□ 1.5
CDK5RAP1Q96SZ6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CDK5RAP1Q96SZ6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDK5RAP1Q96SZ6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CDK5RAP1Q96SZ6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDK5RAP1Q96SZ6 AC021242.3-201ENST00000607598 1377 ntBASIC24.44■■□□□ 1.5
CDK5RAP1Q96SZ6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDK5RAP1Q96SZ6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.44■■□□□ 1.5
CDK5RAP1Q96SZ6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.44■■□□□ 1.5
CDK5RAP1Q96SZ6 MIR4787-201ENST00000607364 84 ntBASIC24.44■■□□□ 1.5
CDK5RAP1Q96SZ6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDK5RAP1Q96SZ6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDK5RAP1Q96SZ6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDK5RAP1Q96SZ6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDK5RAP1Q96SZ6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CDK5RAP1Q96SZ6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.43■■□□□ 1.5
CDK5RAP1Q96SZ6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDK5RAP1Q96SZ6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.43■■□□□ 1.5
CDK5RAP1Q96SZ6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDK5RAP1Q96SZ6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDK5RAP1Q96SZ6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDK5RAP1Q96SZ6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.42■■□□□ 1.5
CDK5RAP1Q96SZ6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.42■■□□□ 1.5
CDK5RAP1Q96SZ6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.42■■□□□ 1.5
CDK5RAP1Q96SZ6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CDK5RAP1Q96SZ6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.42■■□□□ 1.5
CDK5RAP1Q96SZ6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDK5RAP1Q96SZ6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.41■■□□□ 1.5
CDK5RAP1Q96SZ6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDK5RAP1Q96SZ6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.41■■□□□ 1.5
CDK5RAP1Q96SZ6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDK5RAP1Q96SZ6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDK5RAP1Q96SZ6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CDK5RAP1Q96SZ6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CDK5RAP1Q96SZ6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDK5RAP1Q96SZ6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
CDK5RAP1Q96SZ6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CDK5RAP1Q96SZ6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.4■■□□□ 1.5
CDK5RAP1Q96SZ6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDK5RAP1Q96SZ6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CDK5RAP1Q96SZ6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
CDK5RAP1Q96SZ6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CDK5RAP1Q96SZ6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.39■■□□□ 1.5
CDK5RAP1Q96SZ6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.39■■□□□ 1.49
CDK5RAP1Q96SZ6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDK5RAP1Q96SZ6 SLC6A10P-202ENST00000431994 2058 ntBASIC24.39■■□□□ 1.49
CDK5RAP1Q96SZ6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.38■■□□□ 1.49
CDK5RAP1Q96SZ6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDK5RAP1Q96SZ6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDK5RAP1Q96SZ6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDK5RAP1Q96SZ6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDK5RAP1Q96SZ6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.37■■□□□ 1.49
CDK5RAP1Q96SZ6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.37■■□□□ 1.49
CDK5RAP1Q96SZ6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.37■■□□□ 1.49
CDK5RAP1Q96SZ6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.36■■□□□ 1.49
CDK5RAP1Q96SZ6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
CDK5RAP1Q96SZ6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
CDK5RAP1Q96SZ6 MIR6089-201ENST00000616698 64 ntBASIC24.36■■□□□ 1.49
CDK5RAP1Q96SZ6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CDK5RAP1Q96SZ6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDK5RAP1Q96SZ6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDK5RAP1Q96SZ6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.35■■□□□ 1.49
CDK5RAP1Q96SZ6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDK5RAP1Q96SZ6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.35■■□□□ 1.49
CDK5RAP1Q96SZ6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDK5RAP1Q96SZ6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.35■■□□□ 1.49
CDK5RAP1Q96SZ6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDK5RAP1Q96SZ6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
CDK5RAP1Q96SZ6 AF131216.4-201ENST00000638924 1588 ntBASIC24.34■■□□□ 1.49
CDK5RAP1Q96SZ6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CDK5RAP1Q96SZ6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.34■■□□□ 1.49
CDK5RAP1Q96SZ6 AC092028.1-203ENST00000608262 953 ntBASIC24.34■■□□□ 1.49
CDK5RAP1Q96SZ6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CDK5RAP1Q96SZ6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CDK5RAP1Q96SZ6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.34■■□□□ 1.49
CDK5RAP1Q96SZ6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDK5RAP1Q96SZ6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.33■■□□□ 1.49
CDK5RAP1Q96SZ6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.33■■□□□ 1.49
CDK5RAP1Q96SZ6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.33■■□□□ 1.49
CDK5RAP1Q96SZ6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDK5RAP1Q96SZ6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CDK5RAP1Q96SZ6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms