Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB40CQ96S21 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.95■□□□□ 0.62
RAB40CQ96S21 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40CQ96S21 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40CQ96S21 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.95■□□□□ 0.62
RAB40CQ96S21 DUX4L13-201ENST00000554103 1267 ntBASIC18.95■□□□□ 0.62
RAB40CQ96S21 DUX4L15-201ENST00000611059 1267 ntBASIC18.95■□□□□ 0.62
RAB40CQ96S21 DUX4L23-201ENST00000615195 1269 ntBASIC18.95■□□□□ 0.62
RAB40CQ96S21 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40CQ96S21 MIR6089-201ENST00000616698 64 ntBASIC18.95■□□□□ 0.62
RAB40CQ96S21 DUX4L24-201ENST00000617576 1269 ntBASIC18.95■□□□□ 0.62
RAB40CQ96S21 DUX4L22-201ENST00000618238 1269 ntBASIC18.95■□□□□ 0.62
RAB40CQ96S21 DUX4L20-201ENST00000619712 1269 ntBASIC18.95■□□□□ 0.62
RAB40CQ96S21 DUX4L21-201ENST00000622058 1269 ntBASIC18.95■□□□□ 0.62
RAB40CQ96S21 DUX4L10-201ENST00000622460 1267 ntBASIC18.95■□□□□ 0.62
RAB40CQ96S21 DUX4L25-201ENST00000624915 1269 ntBASIC18.95■□□□□ 0.62
RAB40CQ96S21 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RAB40CQ96S21 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40CQ96S21 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40CQ96S21 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB40CQ96S21 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RAB40CQ96S21 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB40CQ96S21 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB40CQ96S21 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB40CQ96S21 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB40CQ96S21 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.93■□□□□ 0.62
RAB40CQ96S21 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40CQ96S21 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40CQ96S21 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40CQ96S21 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB40CQ96S21 ABHD17AP4-201ENST00000411545 909 ntBASIC18.93■□□□□ 0.62
RAB40CQ96S21 ZNRF2P2-203ENST00000454624 420 ntBASIC18.93■□□□□ 0.62
RAB40CQ96S21 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
RAB40CQ96S21 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB40CQ96S21 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.93■□□□□ 0.62
RAB40CQ96S21 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB40CQ96S21 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40CQ96S21 ABCB10P4-201ENST00000566803 2184 ntBASIC18.92■□□□□ 0.62
RAB40CQ96S21 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40CQ96S21 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40CQ96S21 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40CQ96S21 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40CQ96S21 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB40CQ96S21 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RAB40CQ96S21 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RAB40CQ96S21 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB40CQ96S21 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.91■□□□□ 0.62
RAB40CQ96S21 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40CQ96S21 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.91■□□□□ 0.62
RAB40CQ96S21 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40CQ96S21 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RAB40CQ96S21 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40CQ96S21 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB40CQ96S21 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB40CQ96S21 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40CQ96S21 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RAB40CQ96S21 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40CQ96S21 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.9■□□□□ 0.62
RAB40CQ96S21 AC126177.7-201ENST00000547904 679 ntBASIC18.9■□□□□ 0.62
RAB40CQ96S21 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40CQ96S21 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RAB40CQ96S21 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB40CQ96S21 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40CQ96S21 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB40CQ96S21 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAB40CQ96S21 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40CQ96S21 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RAB40CQ96S21 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.89■□□□□ 0.61
RAB40CQ96S21 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40CQ96S21 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40CQ96S21 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40CQ96S21 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40CQ96S21 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40CQ96S21 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB40CQ96S21 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40CQ96S21 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.88■□□□□ 0.61
RAB40CQ96S21 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40CQ96S21 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB40CQ96S21 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB40CQ96S21 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB40CQ96S21 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB40CQ96S21 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB40CQ96S21 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB40CQ96S21 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB40CQ96S21 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB40CQ96S21 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB40CQ96S21 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB40CQ96S21 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB40CQ96S21 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB40CQ96S21 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB40CQ96S21 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB40CQ96S21 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40CQ96S21 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40CQ96S21 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40CQ96S21 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40CQ96S21 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40CQ96S21 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40CQ96S21 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40CQ96S21 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RAB40CQ96S21 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms