Protein–RNA interactions for Protein: Q96KK3

KCNS1, Potassium voltage-gated channel subfamily S member 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS1Q96KK3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.74■□□□□ 0.43
KCNS1Q96KK3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNS1Q96KK3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNS1Q96KK3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNS1Q96KK3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNS1Q96KK3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
KCNS1Q96KK3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNS1Q96KK3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNS1Q96KK3 AC096887.2-201ENST00000623443 1957 ntBASIC17.73■□□□□ 0.43
KCNS1Q96KK3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNS1Q96KK3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KCNS1Q96KK3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNS1Q96KK3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNS1Q96KK3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNS1Q96KK3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KCNS1Q96KK3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNS1Q96KK3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNS1Q96KK3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.72■□□□□ 0.43
KCNS1Q96KK3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.72■□□□□ 0.43
KCNS1Q96KK3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNS1Q96KK3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.72■□□□□ 0.43
KCNS1Q96KK3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KCNS1Q96KK3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
KCNS1Q96KK3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
KCNS1Q96KK3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.71■□□□□ 0.43
KCNS1Q96KK3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNS1Q96KK3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNS1Q96KK3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNS1Q96KK3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNS1Q96KK3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNS1Q96KK3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNS1Q96KK3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.71■□□□□ 0.43
KCNS1Q96KK3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
KCNS1Q96KK3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNS1Q96KK3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KCNS1Q96KK3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
KCNS1Q96KK3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.7■□□□□ 0.42
KCNS1Q96KK3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KCNS1Q96KK3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
KCNS1Q96KK3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
KCNS1Q96KK3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KCNS1Q96KK3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KCNS1Q96KK3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
KCNS1Q96KK3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
KCNS1Q96KK3 AL359504.2-201ENST00000605506 1601 ntBASIC17.69■□□□□ 0.42
KCNS1Q96KK3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
KCNS1Q96KK3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
KCNS1Q96KK3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNS1Q96KK3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNS1Q96KK3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNS1Q96KK3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KCNS1Q96KK3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KCNS1Q96KK3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNS1Q96KK3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.69■□□□□ 0.42
KCNS1Q96KK3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNS1Q96KK3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNS1Q96KK3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNS1Q96KK3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNS1Q96KK3 HLA-V-202ENST00000446817 847 ntBASIC17.68■□□□□ 0.42
KCNS1Q96KK3 ZNRF2P2-203ENST00000454624 420 ntBASIC17.68■□□□□ 0.42
KCNS1Q96KK3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNS1Q96KK3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.68■□□□□ 0.42
KCNS1Q96KK3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.68■□□□□ 0.42
KCNS1Q96KK3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.68■□□□□ 0.42
KCNS1Q96KK3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KCNS1Q96KK3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
KCNS1Q96KK3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.68■□□□□ 0.42
KCNS1Q96KK3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNS1Q96KK3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNS1Q96KK3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
KCNS1Q96KK3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
KCNS1Q96KK3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNS1Q96KK3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNS1Q96KK3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNS1Q96KK3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
KCNS1Q96KK3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
KCNS1Q96KK3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNS1Q96KK3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNS1Q96KK3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
KCNS1Q96KK3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNS1Q96KK3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNS1Q96KK3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNS1Q96KK3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.66■□□□□ 0.42
KCNS1Q96KK3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
KCNS1Q96KK3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNS1Q96KK3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNS1Q96KK3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNS1Q96KK3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNS1Q96KK3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.66■□□□□ 0.42
KCNS1Q96KK3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
KCNS1Q96KK3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNS1Q96KK3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
KCNS1Q96KK3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
KCNS1Q96KK3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.65■□□□□ 0.42
KCNS1Q96KK3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNS1Q96KK3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNS1Q96KK3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
KCNS1Q96KK3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNS1Q96KK3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNS1Q96KK3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms