Protein–RNA interactions for Protein: Q96K19

RNF170, E3 ubiquitin-protein ligase RNF170, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170Q96K19 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RNF170Q96K19 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF170Q96K19 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF170Q96K19 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF170Q96K19 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RNF170Q96K19 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.67■□□□□ 0.9
RNF170Q96K19 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF170Q96K19 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF170Q96K19 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF170Q96K19 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF170Q96K19 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF170Q96K19 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF170Q96K19 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RNF170Q96K19 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF170Q96K19 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RNF170Q96K19 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF170Q96K19 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF170Q96K19 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF170Q96K19 ECEL1P2-201ENST00000461596 1295 ntBASIC20.66■□□□□ 0.9
RNF170Q96K19 AC025884.2-201ENST00000553429 711 ntBASIC20.66■□□□□ 0.9
RNF170Q96K19 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF170Q96K19 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RNF170Q96K19 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF170Q96K19 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF170Q96K19 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF170Q96K19 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF170Q96K19 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF170Q96K19 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF170Q96K19 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF170Q96K19 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF170Q96K19 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF170Q96K19 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF170Q96K19 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF170Q96K19 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF170Q96K19 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RNF170Q96K19 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF170Q96K19 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
RNF170Q96K19 AC097639.1-201ENST00000565519 1891 ntBASIC20.64■□□□□ 0.9
RNF170Q96K19 GPX1-201ENST00000419349 1106 ntBASIC20.64■□□□□ 0.89
RNF170Q96K19 MIR3960-201ENST00000583311 91 ntBASIC20.64■□□□□ 0.89
RNF170Q96K19 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RNF170Q96K19 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF170Q96K19 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF170Q96K19 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF170Q96K19 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF170Q96K19 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF170Q96K19 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF170Q96K19 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RNF170Q96K19 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF170Q96K19 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF170Q96K19 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF170Q96K19 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF170Q96K19 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF170Q96K19 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF170Q96K19 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RNF170Q96K19 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF170Q96K19 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF170Q96K19 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF170Q96K19 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RNF170Q96K19 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF170Q96K19 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF170Q96K19 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF170Q96K19 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF170Q96K19 DUSP8P5-201ENST00000422884 1815 ntBASIC20.62■□□□□ 0.89
RNF170Q96K19 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF170Q96K19 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF170Q96K19 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF170Q96K19 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF170Q96K19 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF170Q96K19 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RNF170Q96K19 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF170Q96K19 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RNF170Q96K19 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF170Q96K19 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.6■□□□□ 0.89
RNF170Q96K19 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF170Q96K19 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF170Q96K19 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF170Q96K19 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF170Q96K19 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF170Q96K19 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF170Q96K19 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF170Q96K19 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF170Q96K19 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF170Q96K19 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF170Q96K19 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RNF170Q96K19 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF170Q96K19 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF170Q96K19 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
RNF170Q96K19 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF170Q96K19 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF170Q96K19 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF170Q96K19 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
RNF170Q96K19 AC096887.2-201ENST00000623443 1957 ntBASIC20.59■□□□□ 0.89
RNF170Q96K19 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF170Q96K19 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF170Q96K19 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF170Q96K19 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
RNF170Q96K19 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF170Q96K19 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RNF170Q96K19 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms