Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.57■■□□□ 1.84
VTI1AQ96AJ9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.57■■□□□ 1.84
VTI1AQ96AJ9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VTI1AQ96AJ9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
VTI1AQ96AJ9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.57■■□□□ 1.84
VTI1AQ96AJ9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
VTI1AQ96AJ9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.56■■□□□ 1.84
VTI1AQ96AJ9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.56■■□□□ 1.84
VTI1AQ96AJ9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.56■■□□□ 1.84
VTI1AQ96AJ9 MIR3621-201ENST00000580529 85 ntBASIC26.56■■□□□ 1.84
VTI1AQ96AJ9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.56■■□□□ 1.84
VTI1AQ96AJ9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
VTI1AQ96AJ9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.56■■□□□ 1.84
VTI1AQ96AJ9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.55■■□□□ 1.84
VTI1AQ96AJ9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VTI1AQ96AJ9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
VTI1AQ96AJ9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
VTI1AQ96AJ9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.55■■□□□ 1.84
VTI1AQ96AJ9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.55■■□□□ 1.84
VTI1AQ96AJ9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
VTI1AQ96AJ9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.55■■□□□ 1.84
VTI1AQ96AJ9 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.55■■□□□ 1.84
VTI1AQ96AJ9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
VTI1AQ96AJ9 AC091060.1-201ENST00000623524 1766 ntBASIC26.54■■□□□ 1.84
VTI1AQ96AJ9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
VTI1AQ96AJ9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
VTI1AQ96AJ9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.53■■□□□ 1.84
VTI1AQ96AJ9 AC096631.2-201ENST00000436136 790 ntBASIC26.53■■□□□ 1.84
VTI1AQ96AJ9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.53■■□□□ 1.84
VTI1AQ96AJ9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
VTI1AQ96AJ9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
VTI1AQ96AJ9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.53■■□□□ 1.84
VTI1AQ96AJ9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
VTI1AQ96AJ9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.53■■□□□ 1.84
VTI1AQ96AJ9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
VTI1AQ96AJ9 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.52■■□□□ 1.84
VTI1AQ96AJ9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.52■■□□□ 1.84
VTI1AQ96AJ9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
VTI1AQ96AJ9 AC110285.6-201ENST00000617652 491 ntBASIC26.52■■□□□ 1.84
VTI1AQ96AJ9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
VTI1AQ96AJ9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.51■■□□□ 1.83
VTI1AQ96AJ9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.51■■□□□ 1.83
VTI1AQ96AJ9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.51■■□□□ 1.83
VTI1AQ96AJ9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.51■■□□□ 1.83
VTI1AQ96AJ9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
VTI1AQ96AJ9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
VTI1AQ96AJ9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VTI1AQ96AJ9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.5■■□□□ 1.83
VTI1AQ96AJ9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VTI1AQ96AJ9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.5■■□□□ 1.83
VTI1AQ96AJ9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.5■■□□□ 1.83
VTI1AQ96AJ9 AC005837.3-201ENST00000612163 286 ntBASIC26.5■■□□□ 1.83
VTI1AQ96AJ9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VTI1AQ96AJ9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
VTI1AQ96AJ9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.5■■□□□ 1.83
VTI1AQ96AJ9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.49■■□□□ 1.83
VTI1AQ96AJ9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.49■■□□□ 1.83
VTI1AQ96AJ9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.49■■□□□ 1.83
VTI1AQ96AJ9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VTI1AQ96AJ9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.49■■□□□ 1.83
VTI1AQ96AJ9 AC011551.1-201ENST00000614101 683 ntBASIC26.49■■□□□ 1.83
VTI1AQ96AJ9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.49■■□□□ 1.83
VTI1AQ96AJ9 AC145676.1-201ENST00000514988 2004 ntBASIC26.49■■□□□ 1.83
VTI1AQ96AJ9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
VTI1AQ96AJ9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
VTI1AQ96AJ9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
VTI1AQ96AJ9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VTI1AQ96AJ9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VTI1AQ96AJ9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.48■■□□□ 1.83
VTI1AQ96AJ9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
VTI1AQ96AJ9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
VTI1AQ96AJ9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
VTI1AQ96AJ9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
VTI1AQ96AJ9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
VTI1AQ96AJ9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
VTI1AQ96AJ9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
VTI1AQ96AJ9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
VTI1AQ96AJ9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.47■■□□□ 1.83
VTI1AQ96AJ9 MIR4466-201ENST00000606121 54 ntBASIC26.47■■□□□ 1.83
VTI1AQ96AJ9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
VTI1AQ96AJ9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
VTI1AQ96AJ9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.47■■□□□ 1.83
VTI1AQ96AJ9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.47■■□□□ 1.83
VTI1AQ96AJ9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
VTI1AQ96AJ9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VTI1AQ96AJ9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VTI1AQ96AJ9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VTI1AQ96AJ9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.46■■□□□ 1.83
VTI1AQ96AJ9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VTI1AQ96AJ9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.46■■□□□ 1.83
VTI1AQ96AJ9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.46■■□□□ 1.83
VTI1AQ96AJ9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.46■■□□□ 1.83
VTI1AQ96AJ9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
VTI1AQ96AJ9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VTI1AQ96AJ9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VTI1AQ96AJ9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.45■■□□□ 1.82
VTI1AQ96AJ9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.45■■□□□ 1.82
VTI1AQ96AJ9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.45■■□□□ 1.82
VTI1AQ96AJ9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
VTI1AQ96AJ9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms