Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3S1Q92572 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.62■□□□□ 0.89
AP3S1Q92572 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3S1Q92572 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
AP3S1Q92572 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
AP3S1Q92572 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.62■□□□□ 0.89
AP3S1Q92572 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3S1Q92572 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.62■□□□□ 0.89
AP3S1Q92572 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.62■□□□□ 0.89
AP3S1Q92572 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.62■□□□□ 0.89
AP3S1Q92572 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
AP3S1Q92572 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3S1Q92572 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3S1Q92572 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AP3S1Q92572 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
AP3S1Q92572 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3S1Q92572 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3S1Q92572 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3S1Q92572 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
AP3S1Q92572 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
AP3S1Q92572 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3S1Q92572 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
AP3S1Q92572 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AP3S1Q92572 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3S1Q92572 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.6■□□□□ 0.89
AP3S1Q92572 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.6■□□□□ 0.89
AP3S1Q92572 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.6■□□□□ 0.89
AP3S1Q92572 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
AP3S1Q92572 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP3S1Q92572 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.59■□□□□ 0.89
AP3S1Q92572 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
AP3S1Q92572 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP3S1Q92572 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP3S1Q92572 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP3S1Q92572 AC097358.2-201ENST00000607541 1159 ntBASIC20.59■□□□□ 0.89
AP3S1Q92572 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.59■□□□□ 0.89
AP3S1Q92572 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP3S1Q92572 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.59■□□□□ 0.89
AP3S1Q92572 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.59■□□□□ 0.89
AP3S1Q92572 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
AP3S1Q92572 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP3S1Q92572 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP3S1Q92572 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP3S1Q92572 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP3S1Q92572 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.58■□□□□ 0.89
AP3S1Q92572 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.58■□□□□ 0.89
AP3S1Q92572 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.58■□□□□ 0.88
AP3S1Q92572 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.58■□□□□ 0.88
AP3S1Q92572 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP3S1Q92572 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP3S1Q92572 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP3S1Q92572 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.57■□□□□ 0.88
AP3S1Q92572 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
AP3S1Q92572 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3S1Q92572 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3S1Q92572 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3S1Q92572 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3S1Q92572 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3S1Q92572 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP3S1Q92572 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP3S1Q92572 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
AP3S1Q92572 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
AP3S1Q92572 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
AP3S1Q92572 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3S1Q92572 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.55■□□□□ 0.88
AP3S1Q92572 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3S1Q92572 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.55■□□□□ 0.88
AP3S1Q92572 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.55■□□□□ 0.88
AP3S1Q92572 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3S1Q92572 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
AP3S1Q92572 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
AP3S1Q92572 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.55■□□□□ 0.88
AP3S1Q92572 AC233723.2-201ENST00000623798 2106 ntBASIC20.54■□□□□ 0.88
AP3S1Q92572 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3S1Q92572 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.54■□□□□ 0.88
AP3S1Q92572 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3S1Q92572 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3S1Q92572 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AP3S1Q92572 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3S1Q92572 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
AP3S1Q92572 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.54■□□□□ 0.88
AP3S1Q92572 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP3S1Q92572 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
AP3S1Q92572 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
AP3S1Q92572 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP3S1Q92572 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP3S1Q92572 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.53■□□□□ 0.88
AP3S1Q92572 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.53■□□□□ 0.88
AP3S1Q92572 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
AP3S1Q92572 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
AP3S1Q92572 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
AP3S1Q92572 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.53■□□□□ 0.88
AP3S1Q92572 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP3S1Q92572 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
AP3S1Q92572 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
AP3S1Q92572 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.52■□□□□ 0.88
AP3S1Q92572 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
AP3S1Q92572 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP3S1Q92572 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
AP3S1Q92572 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms