Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RFFLQ8WZ73 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.92■■□□□ 1.58
RFFLQ8WZ73 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RFFLQ8WZ73 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
RFFLQ8WZ73 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RFFLQ8WZ73 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RFFLQ8WZ73 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
RFFLQ8WZ73 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RFFLQ8WZ73 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
RFFLQ8WZ73 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
RFFLQ8WZ73 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
RFFLQ8WZ73 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
RFFLQ8WZ73 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.9■■□□□ 1.58
RFFLQ8WZ73 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.9■■□□□ 1.58
RFFLQ8WZ73 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RFFLQ8WZ73 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RFFLQ8WZ73 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
RFFLQ8WZ73 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RFFLQ8WZ73 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
RFFLQ8WZ73 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.89■■□□□ 1.58
RFFLQ8WZ73 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RFFLQ8WZ73 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.88■■□□□ 1.57
RFFLQ8WZ73 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RFFLQ8WZ73 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RFFLQ8WZ73 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RFFLQ8WZ73 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RFFLQ8WZ73 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RFFLQ8WZ73 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.87■■□□□ 1.57
RFFLQ8WZ73 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.87■■□□□ 1.57
RFFLQ8WZ73 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.86■■□□□ 1.57
RFFLQ8WZ73 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RFFLQ8WZ73 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RFFLQ8WZ73 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
RFFLQ8WZ73 AC026202.3-201ENST00000600805 1127 ntBASIC24.86■■□□□ 1.57
RFFLQ8WZ73 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RFFLQ8WZ73 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RFFLQ8WZ73 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RFFLQ8WZ73 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RFFLQ8WZ73 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.85■■□□□ 1.57
RFFLQ8WZ73 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
RFFLQ8WZ73 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RFFLQ8WZ73 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.85■■□□□ 1.57
RFFLQ8WZ73 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RFFLQ8WZ73 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RFFLQ8WZ73 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RFFLQ8WZ73 KRT18P10-201ENST00000388836 1287 ntBASIC24.84■■□□□ 1.57
RFFLQ8WZ73 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RFFLQ8WZ73 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.83■■□□□ 1.57
RFFLQ8WZ73 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RFFLQ8WZ73 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RFFLQ8WZ73 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RFFLQ8WZ73 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RFFLQ8WZ73 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RFFLQ8WZ73 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
RFFLQ8WZ73 FOXO3B-201ENST00000395675 1928 ntBASIC24.82■■□□□ 1.56
RFFLQ8WZ73 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
RFFLQ8WZ73 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
RFFLQ8WZ73 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RFFLQ8WZ73 AC004812.2-201ENST00000611079 2094 ntBASIC24.81■■□□□ 1.56
RFFLQ8WZ73 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.81■■□□□ 1.56
RFFLQ8WZ73 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RFFLQ8WZ73 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.81■■□□□ 1.56
RFFLQ8WZ73 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.81■■□□□ 1.56
RFFLQ8WZ73 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
RFFLQ8WZ73 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.8■■□□□ 1.56
RFFLQ8WZ73 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
RFFLQ8WZ73 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
RFFLQ8WZ73 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RFFLQ8WZ73 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RFFLQ8WZ73 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RFFLQ8WZ73 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RFFLQ8WZ73 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
RFFLQ8WZ73 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RFFLQ8WZ73 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.79■■□□□ 1.56
RFFLQ8WZ73 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RFFLQ8WZ73 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RFFLQ8WZ73 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RFFLQ8WZ73 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.79■■□□□ 1.56
RFFLQ8WZ73 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RFFLQ8WZ73 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RFFLQ8WZ73 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RFFLQ8WZ73 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RFFLQ8WZ73 HLA-L-211ENST00000482052 1765 ntBASIC24.78■■□□□ 1.56
RFFLQ8WZ73 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
RFFLQ8WZ73 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.78■■□□□ 1.56
RFFLQ8WZ73 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RFFLQ8WZ73 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.77■■□□□ 1.56
RFFLQ8WZ73 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RFFLQ8WZ73 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.77■■□□□ 1.56
RFFLQ8WZ73 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RFFLQ8WZ73 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.77■■□□□ 1.56
RFFLQ8WZ73 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RFFLQ8WZ73 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RFFLQ8WZ73 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.77■■□□□ 1.56
RFFLQ8WZ73 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.77■■□□□ 1.56
RFFLQ8WZ73 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
RFFLQ8WZ73 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
RFFLQ8WZ73 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RFFLQ8WZ73 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
RFFLQ8WZ73 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms