Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM4Q8WVI0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SMIM4Q8WVI0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM4Q8WVI0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM4Q8WVI0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.06■□□□□ 0.8
SMIM4Q8WVI0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM4Q8WVI0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM4Q8WVI0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SMIM4Q8WVI0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM4Q8WVI0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM4Q8WVI0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM4Q8WVI0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.05■□□□□ 0.8
SMIM4Q8WVI0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM4Q8WVI0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SMIM4Q8WVI0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SMIM4Q8WVI0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM4Q8WVI0 AC233723.2-201ENST00000623798 2106 ntBASIC20.04■□□□□ 0.8
SMIM4Q8WVI0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM4Q8WVI0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM4Q8WVI0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM4Q8WVI0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM4Q8WVI0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM4Q8WVI0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SMIM4Q8WVI0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM4Q8WVI0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM4Q8WVI0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SMIM4Q8WVI0 MIR3665-201ENST00000578708 105 ntBASIC20.03■□□□□ 0.8
SMIM4Q8WVI0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM4Q8WVI0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM4Q8WVI0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SMIM4Q8WVI0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.03■□□□□ 0.8
SMIM4Q8WVI0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM4Q8WVI0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM4Q8WVI0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM4Q8WVI0 LINC00565-201ENST00000562710 2331 ntBASIC20.02■□□□□ 0.8
SMIM4Q8WVI0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMIM4Q8WVI0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMIM4Q8WVI0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.02■□□□□ 0.8
SMIM4Q8WVI0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMIM4Q8WVI0 EP400NL-214ENST00000641289 2402 ntBASIC20.02■□□□□ 0.79
SMIM4Q8WVI0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.02■□□□□ 0.79
SMIM4Q8WVI0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM4Q8WVI0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM4Q8WVI0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.01■□□□□ 0.79
SMIM4Q8WVI0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM4Q8WVI0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.01■□□□□ 0.79
SMIM4Q8WVI0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM4Q8WVI0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM4Q8WVI0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20■□□□□ 0.79
SMIM4Q8WVI0 AL359258.2-201ENST00000564063 1566 ntBASIC20■□□□□ 0.79
SMIM4Q8WVI0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20■□□□□ 0.79
SMIM4Q8WVI0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMIM4Q8WVI0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20■□□□□ 0.79
SMIM4Q8WVI0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMIM4Q8WVI0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMIM4Q8WVI0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SMIM4Q8WVI0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SMIM4Q8WVI0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20■□□□□ 0.79
SMIM4Q8WVI0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMIM4Q8WVI0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMIM4Q8WVI0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM4Q8WVI0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM4Q8WVI0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.99■□□□□ 0.79
SMIM4Q8WVI0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SMIM4Q8WVI0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.99■□□□□ 0.79
SMIM4Q8WVI0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.99■□□□□ 0.79
SMIM4Q8WVI0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM4Q8WVI0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM4Q8WVI0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.99■□□□□ 0.79
SMIM4Q8WVI0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM4Q8WVI0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
SMIM4Q8WVI0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.98■□□□□ 0.79
SMIM4Q8WVI0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.98■□□□□ 0.79
SMIM4Q8WVI0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM4Q8WVI0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SMIM4Q8WVI0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM4Q8WVI0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM4Q8WVI0 MIR219A2-201ENST00000608502 1504 ntBASIC19.97■□□□□ 0.79
SMIM4Q8WVI0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.97■□□□□ 0.79
SMIM4Q8WVI0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM4Q8WVI0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SMIM4Q8WVI0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SMIM4Q8WVI0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.96■□□□□ 0.79
SMIM4Q8WVI0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SMIM4Q8WVI0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SMIM4Q8WVI0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM4Q8WVI0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM4Q8WVI0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SMIM4Q8WVI0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM4Q8WVI0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SMIM4Q8WVI0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
SMIM4Q8WVI0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
SMIM4Q8WVI0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM4Q8WVI0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SMIM4Q8WVI0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SMIM4Q8WVI0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM4Q8WVI0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.95■□□□□ 0.78
SMIM4Q8WVI0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM4Q8WVI0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM4Q8WVI0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms