Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF138Q8WVD3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
RNF138Q8WVD3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RNF138Q8WVD3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF138Q8WVD3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF138Q8WVD3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF138Q8WVD3 AC022211.4-201ENST00000625094 2161 ntBASIC21.45■■□□□ 1.02
RNF138Q8WVD3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF138Q8WVD3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.02
RNF138Q8WVD3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF138Q8WVD3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF138Q8WVD3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF138Q8WVD3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF138Q8WVD3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF138Q8WVD3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF138Q8WVD3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RNF138Q8WVD3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF138Q8WVD3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF138Q8WVD3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF138Q8WVD3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF138Q8WVD3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.43■■□□□ 1.02
RNF138Q8WVD3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF138Q8WVD3 AC142381.3-201ENST00000568208 1670 ntBASIC21.43■■□□□ 1.02
RNF138Q8WVD3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF138Q8WVD3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF138Q8WVD3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF138Q8WVD3 AL031848.2-201ENST00000607670 837 ntBASIC21.42■■□□□ 1.02
RNF138Q8WVD3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RNF138Q8WVD3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF138Q8WVD3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF138Q8WVD3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF138Q8WVD3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF138Q8WVD3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RNF138Q8WVD3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.41■■□□□ 1.02
RNF138Q8WVD3 THA1P-201ENST00000590384 1145 ntBASIC21.41■■□□□ 1.02
RNF138Q8WVD3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF138Q8WVD3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF138Q8WVD3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF138Q8WVD3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF138Q8WVD3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF138Q8WVD3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF138Q8WVD3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF138Q8WVD3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF138Q8WVD3 MIR4281-201ENST00000580852 62 ntBASIC21.4■■□□□ 1.02
RNF138Q8WVD3 AL451085.2-201ENST00000605085 799 ntBASIC21.4■■□□□ 1.02
RNF138Q8WVD3 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF138Q8WVD3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF138Q8WVD3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF138Q8WVD3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF138Q8WVD3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
RNF138Q8WVD3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF138Q8WVD3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF138Q8WVD3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
RNF138Q8WVD3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.39■■□□□ 1.01
RNF138Q8WVD3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.39■■□□□ 1.01
RNF138Q8WVD3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF138Q8WVD3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF138Q8WVD3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF138Q8WVD3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF138Q8WVD3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF138Q8WVD3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF138Q8WVD3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF138Q8WVD3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF138Q8WVD3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RNF138Q8WVD3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF138Q8WVD3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.37■■□□□ 1.01
RNF138Q8WVD3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF138Q8WVD3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF138Q8WVD3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF138Q8WVD3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF138Q8WVD3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF138Q8WVD3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF138Q8WVD3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF138Q8WVD3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF138Q8WVD3 AP003733.4-201ENST00000623785 1697 ntBASIC21.35■■□□□ 1.01
RNF138Q8WVD3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF138Q8WVD3 AC137630.3-201ENST00000607245 391 ntBASIC21.35■■□□□ 1.01
RNF138Q8WVD3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF138Q8WVD3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF138Q8WVD3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF138Q8WVD3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF138Q8WVD3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF138Q8WVD3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF138Q8WVD3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF138Q8WVD3 AC138932.3-201ENST00000567634 1902 ntBASIC21.34■■□□□ 1.01
RNF138Q8WVD3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF138Q8WVD3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF138Q8WVD3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF138Q8WVD3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
RNF138Q8WVD3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RNF138Q8WVD3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF138Q8WVD3 AF131216.4-201ENST00000638924 1588 ntBASIC21.33■■□□□ 1.01
RNF138Q8WVD3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF138Q8WVD3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF138Q8WVD3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF138Q8WVD3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.32■■□□□ 1
RNF138Q8WVD3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.32■■□□□ 1
RNF138Q8WVD3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
RNF138Q8WVD3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF138Q8WVD3 AC009299.2-201ENST00000482477 511 ntBASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms