Protein–RNA interactions for Protein: Q8WTV0

SCARB1, Scavenger receptor class B member 1, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1Q8WTV0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCARB1Q8WTV0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCARB1Q8WTV0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCARB1Q8WTV0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCARB1Q8WTV0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCARB1Q8WTV0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SCARB1Q8WTV0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.53■□□□□ 0.72
SCARB1Q8WTV0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCARB1Q8WTV0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCARB1Q8WTV0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.53■□□□□ 0.72
SCARB1Q8WTV0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCARB1Q8WTV0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCARB1Q8WTV0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCARB1Q8WTV0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCARB1Q8WTV0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SCARB1Q8WTV0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SCARB1Q8WTV0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCARB1Q8WTV0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCARB1Q8WTV0 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.52■□□□□ 0.72
SCARB1Q8WTV0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCARB1Q8WTV0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCARB1Q8WTV0 C1orf229-201ENST00000623686 2258 ntBASIC19.51■□□□□ 0.71
SCARB1Q8WTV0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SCARB1Q8WTV0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCARB1Q8WTV0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCARB1Q8WTV0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCARB1Q8WTV0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCARB1Q8WTV0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCARB1Q8WTV0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCARB1Q8WTV0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.51■□□□□ 0.71
SCARB1Q8WTV0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCARB1Q8WTV0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCARB1Q8WTV0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SCARB1Q8WTV0 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.5■□□□□ 0.71
SCARB1Q8WTV0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.5■□□□□ 0.71
SCARB1Q8WTV0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCARB1Q8WTV0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.5■□□□□ 0.71
SCARB1Q8WTV0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SCARB1Q8WTV0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCARB1Q8WTV0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCARB1Q8WTV0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCARB1Q8WTV0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCARB1Q8WTV0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCARB1Q8WTV0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCARB1Q8WTV0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.49■□□□□ 0.71
SCARB1Q8WTV0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.49■□□□□ 0.71
SCARB1Q8WTV0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCARB1Q8WTV0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCARB1Q8WTV0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCARB1Q8WTV0 SLC25A24-204ENST00000569674 2357 ntBASIC19.49■□□□□ 0.71
SCARB1Q8WTV0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SCARB1Q8WTV0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SCARB1Q8WTV0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.48■□□□□ 0.71
SCARB1Q8WTV0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SCARB1Q8WTV0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.48■□□□□ 0.71
SCARB1Q8WTV0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.48■□□□□ 0.71
SCARB1Q8WTV0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.48■□□□□ 0.71
SCARB1Q8WTV0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCARB1Q8WTV0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCARB1Q8WTV0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SCARB1Q8WTV0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCARB1Q8WTV0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.47■□□□□ 0.71
SCARB1Q8WTV0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 AC233723.2-201ENST00000623798 2106 ntBASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 DUX4L13-201ENST00000554103 1267 ntBASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 DUX4L15-201ENST00000611059 1267 ntBASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 DUX4L23-201ENST00000615195 1269 ntBASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 DUX4L24-201ENST00000617576 1269 ntBASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 DUX4L22-201ENST00000618238 1269 ntBASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 DUX4L20-201ENST00000619712 1269 ntBASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 DUX4L21-201ENST00000622058 1269 ntBASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 DUX4L10-201ENST00000622460 1267 ntBASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 DUX4L25-201ENST00000624915 1269 ntBASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCARB1Q8WTV0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCARB1Q8WTV0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCARB1Q8WTV0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCARB1Q8WTV0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCARB1Q8WTV0 DUX4L11-201ENST00000611504 1267 ntBASIC19.45■□□□□ 0.7
SCARB1Q8WTV0 DUX4L12-201ENST00000614593 1267 ntBASIC19.45■□□□□ 0.7
SCARB1Q8WTV0 DUX4L14-201ENST00000621227 1267 ntBASIC19.45■□□□□ 0.7
SCARB1Q8WTV0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.45■□□□□ 0.7
SCARB1Q8WTV0 AC137767.1-201ENST00000602918 1920 ntBASIC19.45■□□□□ 0.7
SCARB1Q8WTV0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.44■□□□□ 0.7
SCARB1Q8WTV0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCARB1Q8WTV0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCARB1Q8WTV0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
SCARB1Q8WTV0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms