Protein–RNA interactions for Protein: Q8TD19

NEK9, Serine/threonine-protein kinase Nek9, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9Q8TD19 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NEK9Q8TD19 AC103724.3-201ENST00000564481 992 ntBASIC26.39■■□□□ 1.82
NEK9Q8TD19 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
NEK9Q8TD19 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
NEK9Q8TD19 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.38■■□□□ 1.81
NEK9Q8TD19 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
NEK9Q8TD19 AC011551.1-201ENST00000614101 683 ntBASIC26.38■■□□□ 1.81
NEK9Q8TD19 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
NEK9Q8TD19 SLC6A10P-202ENST00000431994 2058 ntBASIC26.38■■□□□ 1.81
NEK9Q8TD19 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
NEK9Q8TD19 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NEK9Q8TD19 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
NEK9Q8TD19 KRT18P24-201ENST00000344739 1156 ntBASIC26.37■■□□□ 1.81
NEK9Q8TD19 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NEK9Q8TD19 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.37■■□□□ 1.81
NEK9Q8TD19 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NEK9Q8TD19 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
NEK9Q8TD19 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NEK9Q8TD19 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.36■■□□□ 1.81
NEK9Q8TD19 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NEK9Q8TD19 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.36■■□□□ 1.81
NEK9Q8TD19 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NEK9Q8TD19 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
NEK9Q8TD19 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.36■■□□□ 1.81
NEK9Q8TD19 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NEK9Q8TD19 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.35■■□□□ 1.81
NEK9Q8TD19 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NEK9Q8TD19 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
NEK9Q8TD19 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
NEK9Q8TD19 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NEK9Q8TD19 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NEK9Q8TD19 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NEK9Q8TD19 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.34■■□□□ 1.81
NEK9Q8TD19 AL031848.2-201ENST00000607670 837 ntBASIC26.34■■□□□ 1.81
NEK9Q8TD19 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.34■■□□□ 1.81
NEK9Q8TD19 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.34■■□□□ 1.81
NEK9Q8TD19 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
NEK9Q8TD19 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.33■■□□□ 1.81
NEK9Q8TD19 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.33■■□□□ 1.81
NEK9Q8TD19 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.33■■□□□ 1.81
NEK9Q8TD19 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
NEK9Q8TD19 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.33■■□□□ 1.81
NEK9Q8TD19 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NEK9Q8TD19 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.32■■□□□ 1.8
NEK9Q8TD19 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NEK9Q8TD19 AC120024.1-201ENST00000562672 995 ntBASIC26.32■■□□□ 1.8
NEK9Q8TD19 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.32■■□□□ 1.8
NEK9Q8TD19 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.31■■□□□ 1.8
NEK9Q8TD19 AC135731.1-201ENST00000569415 2548 ntBASIC26.31■■□□□ 1.8
NEK9Q8TD19 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NEK9Q8TD19 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
NEK9Q8TD19 MIR6089-201ENST00000616698 64 ntBASIC26.31■■□□□ 1.8
NEK9Q8TD19 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NEK9Q8TD19 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NEK9Q8TD19 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.31■■□□□ 1.8
NEK9Q8TD19 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NEK9Q8TD19 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NEK9Q8TD19 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.3■■□□□ 1.8
NEK9Q8TD19 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
NEK9Q8TD19 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.3■■□□□ 1.8
NEK9Q8TD19 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NEK9Q8TD19 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NEK9Q8TD19 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.3■■□□□ 1.8
NEK9Q8TD19 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NEK9Q8TD19 AC090877.2-201ENST00000558441 1738 ntBASIC26.29■■□□□ 1.8
NEK9Q8TD19 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.29■■□□□ 1.8
NEK9Q8TD19 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NEK9Q8TD19 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NEK9Q8TD19 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
NEK9Q8TD19 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.28■■□□□ 1.8
NEK9Q8TD19 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.28■■□□□ 1.8
NEK9Q8TD19 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
NEK9Q8TD19 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
NEK9Q8TD19 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NEK9Q8TD19 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
NEK9Q8TD19 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.27■■□□□ 1.8
NEK9Q8TD19 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
NEK9Q8TD19 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NEK9Q8TD19 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NEK9Q8TD19 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NEK9Q8TD19 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NEK9Q8TD19 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.26■■□□□ 1.79
NEK9Q8TD19 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NEK9Q8TD19 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NEK9Q8TD19 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.26■■□□□ 1.79
NEK9Q8TD19 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NEK9Q8TD19 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NEK9Q8TD19 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK9Q8TD19 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK9Q8TD19 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.24■■□□□ 1.79
NEK9Q8TD19 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK9Q8TD19 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.24■■□□□ 1.79
NEK9Q8TD19 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK9Q8TD19 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK9Q8TD19 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.24■■□□□ 1.79
NEK9Q8TD19 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.24■■□□□ 1.79
NEK9Q8TD19 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.24■■□□□ 1.79
NEK9Q8TD19 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
NEK9Q8TD19 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.23■■□□□ 1.79
NEK9Q8TD19 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms