Protein–RNA interactions for Protein: Q8NC42

RNF149, E3 ubiquitin-protein ligase RNF149, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149Q8NC42 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.91■■□□□ 1.74
RNF149Q8NC42 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.9■■□□□ 1.74
RNF149Q8NC42 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.9■■□□□ 1.74
RNF149Q8NC42 MIR4787-201ENST00000607364 84 ntBASIC25.9■■□□□ 1.74
RNF149Q8NC42 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
RNF149Q8NC42 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RNF149Q8NC42 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RNF149Q8NC42 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.89■■□□□ 1.74
RNF149Q8NC42 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
RNF149Q8NC42 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RNF149Q8NC42 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RNF149Q8NC42 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RNF149Q8NC42 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RNF149Q8NC42 AC021242.3-201ENST00000607598 1377 ntBASIC25.87■■□□□ 1.73
RNF149Q8NC42 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
RNF149Q8NC42 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.87■■□□□ 1.73
RNF149Q8NC42 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.87■■□□□ 1.73
RNF149Q8NC42 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.87■■□□□ 1.73
RNF149Q8NC42 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.87■■□□□ 1.73
RNF149Q8NC42 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
RNF149Q8NC42 AC090877.2-201ENST00000558441 1738 ntBASIC25.86■■□□□ 1.73
RNF149Q8NC42 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RNF149Q8NC42 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RNF149Q8NC42 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
RNF149Q8NC42 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
RNF149Q8NC42 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.86■■□□□ 1.73
RNF149Q8NC42 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RNF149Q8NC42 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
RNF149Q8NC42 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RNF149Q8NC42 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.85■■□□□ 1.73
RNF149Q8NC42 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RNF149Q8NC42 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.84■■□□□ 1.73
RNF149Q8NC42 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.84■■□□□ 1.73
RNF149Q8NC42 SLC6A10P-202ENST00000431994 2058 ntBASIC25.84■■□□□ 1.73
RNF149Q8NC42 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.84■■□□□ 1.73
RNF149Q8NC42 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
RNF149Q8NC42 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
RNF149Q8NC42 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.83■■□□□ 1.73
RNF149Q8NC42 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.83■■□□□ 1.73
RNF149Q8NC42 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RNF149Q8NC42 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.82■■□□□ 1.72
RNF149Q8NC42 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RNF149Q8NC42 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RNF149Q8NC42 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.82■■□□□ 1.72
RNF149Q8NC42 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RNF149Q8NC42 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RNF149Q8NC42 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.81■■□□□ 1.72
RNF149Q8NC42 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
RNF149Q8NC42 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
RNF149Q8NC42 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RNF149Q8NC42 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RNF149Q8NC42 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.8■■□□□ 1.72
RNF149Q8NC42 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
RNF149Q8NC42 AL356441.2-201ENST00000443009 864 ntBASIC25.8■■□□□ 1.72
RNF149Q8NC42 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.8■■□□□ 1.72
RNF149Q8NC42 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
RNF149Q8NC42 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
RNF149Q8NC42 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.79■■□□□ 1.72
RNF149Q8NC42 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RNF149Q8NC42 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RNF149Q8NC42 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RNF149Q8NC42 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RNF149Q8NC42 AF131216.4-201ENST00000638924 1588 ntBASIC25.78■■□□□ 1.72
RNF149Q8NC42 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.78■■□□□ 1.72
RNF149Q8NC42 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
RNF149Q8NC42 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.78■■□□□ 1.72
RNF149Q8NC42 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.78■■□□□ 1.72
RNF149Q8NC42 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
RNF149Q8NC42 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.77■■□□□ 1.72
RNF149Q8NC42 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.77■■□□□ 1.72
RNF149Q8NC42 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
RNF149Q8NC42 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.77■■□□□ 1.72
RNF149Q8NC42 UNC93B8-201ENST00000511903 705 ntBASIC25.77■■□□□ 1.72
RNF149Q8NC42 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.77■■□□□ 1.72
RNF149Q8NC42 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RNF149Q8NC42 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.72
RNF149Q8NC42 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.76■■□□□ 1.71
RNF149Q8NC42 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.76■■□□□ 1.71
RNF149Q8NC42 TSPY9P-201ENST00000440215 945 ntBASIC25.76■■□□□ 1.71
RNF149Q8NC42 TSPY11P-201ENST00000442607 1045 ntBASIC25.76■■□□□ 1.71
RNF149Q8NC42 AC092028.1-203ENST00000608262 953 ntBASIC25.76■■□□□ 1.71
RNF149Q8NC42 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RNF149Q8NC42 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.75■■□□□ 1.71
RNF149Q8NC42 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RNF149Q8NC42 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RNF149Q8NC42 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RNF149Q8NC42 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.75■■□□□ 1.71
RNF149Q8NC42 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.75■■□□□ 1.71
RNF149Q8NC42 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
RNF149Q8NC42 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RNF149Q8NC42 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RNF149Q8NC42 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.74■■□□□ 1.71
RNF149Q8NC42 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RNF149Q8NC42 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.74■■□□□ 1.71
RNF149Q8NC42 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.74■■□□□ 1.71
RNF149Q8NC42 AC131212.1-201ENST00000613771 668 ntBASIC25.74■■□□□ 1.71
RNF149Q8NC42 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
RNF149Q8NC42 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RNF149Q8NC42 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.74■■□□□ 1.71
RNF149Q8NC42 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms