Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PAF1Q8N7H5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
PAF1Q8N7H5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PAF1Q8N7H5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PAF1Q8N7H5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
PAF1Q8N7H5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
PAF1Q8N7H5 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
PAF1Q8N7H5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PAF1Q8N7H5 LONRF2P2-201ENST00000439212 571 ntBASIC23.95■■□□□ 1.42
PAF1Q8N7H5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.95■■□□□ 1.42
PAF1Q8N7H5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.95■■□□□ 1.42
PAF1Q8N7H5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.95■■□□□ 1.42
PAF1Q8N7H5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
PAF1Q8N7H5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PAF1Q8N7H5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PAF1Q8N7H5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PAF1Q8N7H5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.95■■□□□ 1.42
PAF1Q8N7H5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PAF1Q8N7H5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PAF1Q8N7H5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.94■■□□□ 1.42
PAF1Q8N7H5 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PAF1Q8N7H5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PAF1Q8N7H5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
PAF1Q8N7H5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PAF1Q8N7H5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.93■■□□□ 1.42
PAF1Q8N7H5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PAF1Q8N7H5 RARRES2P1-201ENST00000474487 481 ntBASIC23.93■■□□□ 1.42
PAF1Q8N7H5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.93■■□□□ 1.42
PAF1Q8N7H5 PVT1_1.1-201ENST00000615125 194 ntBASIC23.93■■□□□ 1.42
PAF1Q8N7H5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.93■■□□□ 1.42
PAF1Q8N7H5 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PAF1Q8N7H5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PAF1Q8N7H5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.92■■□□□ 1.42
PAF1Q8N7H5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PAF1Q8N7H5 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PAF1Q8N7H5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
PAF1Q8N7H5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
PAF1Q8N7H5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PAF1Q8N7H5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
PAF1Q8N7H5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.91■■□□□ 1.42
PAF1Q8N7H5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PAF1Q8N7H5 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PAF1Q8N7H5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.9■■□□□ 1.42
PAF1Q8N7H5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
PAF1Q8N7H5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PAF1Q8N7H5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.89■■□□□ 1.41
PAF1Q8N7H5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PAF1Q8N7H5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.89■■□□□ 1.41
PAF1Q8N7H5 AC019171.1-201ENST00000601251 1056 ntBASIC23.89■■□□□ 1.41
PAF1Q8N7H5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PAF1Q8N7H5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PAF1Q8N7H5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PAF1Q8N7H5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
PAF1Q8N7H5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.89■■□□□ 1.41
PAF1Q8N7H5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PAF1Q8N7H5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PAF1Q8N7H5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PAF1Q8N7H5 AL592295.1-201ENST00000400984 884 ntBASIC23.88■■□□□ 1.41
PAF1Q8N7H5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PAF1Q8N7H5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PAF1Q8N7H5 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PAF1Q8N7H5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
PAF1Q8N7H5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
PAF1Q8N7H5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PAF1Q8N7H5 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PAF1Q8N7H5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.87■■□□□ 1.41
PAF1Q8N7H5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.87■■□□□ 1.41
PAF1Q8N7H5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PAF1Q8N7H5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PAF1Q8N7H5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.87■■□□□ 1.41
PAF1Q8N7H5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
PAF1Q8N7H5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PAF1Q8N7H5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PAF1Q8N7H5 FOXO3B-201ENST00000395675 1928 ntBASIC23.86■■□□□ 1.41
PAF1Q8N7H5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PAF1Q8N7H5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
PAF1Q8N7H5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.85■■□□□ 1.41
PAF1Q8N7H5 AC022616.5-201ENST00000518796 181 ntBASIC23.85■■□□□ 1.41
PAF1Q8N7H5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
PAF1Q8N7H5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PAF1Q8N7H5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PAF1Q8N7H5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
PAF1Q8N7H5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PAF1Q8N7H5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PAF1Q8N7H5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PAF1Q8N7H5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PAF1Q8N7H5 MIR4508-201ENST00000584178 70 ntBASIC23.84■■□□□ 1.41
PAF1Q8N7H5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PAF1Q8N7H5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC23.83■■□□□ 1.41
PAF1Q8N7H5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
PAF1Q8N7H5 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PAF1Q8N7H5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PAF1Q8N7H5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.83■■□□□ 1.41
PAF1Q8N7H5 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PAF1Q8N7H5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PAF1Q8N7H5 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PAF1Q8N7H5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PAF1Q8N7H5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
PAF1Q8N7H5 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.81■■□□□ 1.4
PAF1Q8N7H5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms