Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AC103834.1-201ENST00000520383 144 ntBASIC25.05■■□□□ 1.6
TTC39CQ8N584 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
TTC39CQ8N584 AC090877.2-201ENST00000558441 1738 ntBASIC25.05■■□□□ 1.6
TTC39CQ8N584 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.05■■□□□ 1.6
TTC39CQ8N584 AP003733.4-201ENST00000623785 1697 ntBASIC25.04■■□□□ 1.6
TTC39CQ8N584 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
TTC39CQ8N584 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TTC39CQ8N584 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TTC39CQ8N584 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
TTC39CQ8N584 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.04■■□□□ 1.6
TTC39CQ8N584 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.04■■□□□ 1.6
TTC39CQ8N584 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
TTC39CQ8N584 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.03■■□□□ 1.6
TTC39CQ8N584 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
TTC39CQ8N584 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TTC39CQ8N584 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.03■■□□□ 1.6
TTC39CQ8N584 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.02■■□□□ 1.6
TTC39CQ8N584 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.02■■□□□ 1.6
TTC39CQ8N584 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TTC39CQ8N584 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TTC39CQ8N584 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TTC39CQ8N584 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.02■■□□□ 1.6
TTC39CQ8N584 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
TTC39CQ8N584 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.02■■□□□ 1.6
TTC39CQ8N584 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.02■■□□□ 1.6
TTC39CQ8N584 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TTC39CQ8N584 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
TTC39CQ8N584 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TTC39CQ8N584 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TTC39CQ8N584 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.01■■□□□ 1.59
TTC39CQ8N584 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TTC39CQ8N584 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.01■■□□□ 1.59
TTC39CQ8N584 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TTC39CQ8N584 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25■■□□□ 1.59
TTC39CQ8N584 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25■■□□□ 1.59
TTC39CQ8N584 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25■■□□□ 1.59
TTC39CQ8N584 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TTC39CQ8N584 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25■■□□□ 1.59
TTC39CQ8N584 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TTC39CQ8N584 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
TTC39CQ8N584 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TTC39CQ8N584 KRT8P33-201ENST00000508125 1423 ntBASIC24.99■■□□□ 1.59
TTC39CQ8N584 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TTC39CQ8N584 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TTC39CQ8N584 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TTC39CQ8N584 THA1P-201ENST00000590384 1145 ntBASIC24.99■■□□□ 1.59
TTC39CQ8N584 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TTC39CQ8N584 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.98■■□□□ 1.59
TTC39CQ8N584 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.98■■□□□ 1.59
TTC39CQ8N584 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.98■■□□□ 1.59
TTC39CQ8N584 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TTC39CQ8N584 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TTC39CQ8N584 AC120024.1-201ENST00000562672 995 ntBASIC24.98■■□□□ 1.59
TTC39CQ8N584 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
TTC39CQ8N584 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TTC39CQ8N584 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TTC39CQ8N584 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TTC39CQ8N584 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TTC39CQ8N584 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TTC39CQ8N584 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
TTC39CQ8N584 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TTC39CQ8N584 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.97■■□□□ 1.59
TTC39CQ8N584 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TTC39CQ8N584 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TTC39CQ8N584 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TTC39CQ8N584 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.96■■□□□ 1.59
TTC39CQ8N584 AC103724.3-201ENST00000564481 992 ntBASIC24.96■■□□□ 1.59
TTC39CQ8N584 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TTC39CQ8N584 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.95■■□□□ 1.59
TTC39CQ8N584 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TTC39CQ8N584 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.95■■□□□ 1.58
TTC39CQ8N584 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.95■■□□□ 1.58
TTC39CQ8N584 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.95■■□□□ 1.58
TTC39CQ8N584 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
TTC39CQ8N584 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TTC39CQ8N584 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TTC39CQ8N584 AL031848.2-201ENST00000607670 837 ntBASIC24.94■■□□□ 1.58
TTC39CQ8N584 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TTC39CQ8N584 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.94■■□□□ 1.58
TTC39CQ8N584 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
TTC39CQ8N584 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TTC39CQ8N584 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TTC39CQ8N584 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TTC39CQ8N584 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
TTC39CQ8N584 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
TTC39CQ8N584 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
TTC39CQ8N584 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.93■■□□□ 1.58
TTC39CQ8N584 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
TTC39CQ8N584 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TTC39CQ8N584 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TTC39CQ8N584 RARRES2P1-201ENST00000474487 481 ntBASIC24.92■■□□□ 1.58
TTC39CQ8N584 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
TTC39CQ8N584 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.92■■□□□ 1.58
TTC39CQ8N584 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TTC39CQ8N584 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.92■■□□□ 1.58
TTC39CQ8N584 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TTC39CQ8N584 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
TTC39CQ8N584 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TTC39CQ8N584 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TTC39CQ8N584 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms