Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CR559946.2-201ENST00000623684 991 ntBASIC23.29■■□□□ 1.32
TRIM42Q8IWZ5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.29■■□□□ 1.32
TRIM42Q8IWZ5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM42Q8IWZ5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM42Q8IWZ5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.28■■□□□ 1.32
TRIM42Q8IWZ5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
TRIM42Q8IWZ5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM42Q8IWZ5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM42Q8IWZ5 MIR6089-201ENST00000616698 64 ntBASIC23.28■■□□□ 1.32
TRIM42Q8IWZ5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.28■■□□□ 1.32
TRIM42Q8IWZ5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM42Q8IWZ5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM42Q8IWZ5 AC004812.2-201ENST00000611079 2094 ntBASIC23.28■■□□□ 1.32
TRIM42Q8IWZ5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM42Q8IWZ5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM42Q8IWZ5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM42Q8IWZ5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.27■■□□□ 1.32
TRIM42Q8IWZ5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.27■■□□□ 1.32
TRIM42Q8IWZ5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM42Q8IWZ5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM42Q8IWZ5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
TRIM42Q8IWZ5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.27■■□□□ 1.32
TRIM42Q8IWZ5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM42Q8IWZ5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM42Q8IWZ5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM42Q8IWZ5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TRIM42Q8IWZ5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM42Q8IWZ5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
TRIM42Q8IWZ5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM42Q8IWZ5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM42Q8IWZ5 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.26■■□□□ 1.31
TRIM42Q8IWZ5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM42Q8IWZ5 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.26■■□□□ 1.31
TRIM42Q8IWZ5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM42Q8IWZ5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.26■■□□□ 1.31
TRIM42Q8IWZ5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM42Q8IWZ5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
TRIM42Q8IWZ5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM42Q8IWZ5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.25■■□□□ 1.31
TRIM42Q8IWZ5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM42Q8IWZ5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TRIM42Q8IWZ5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM42Q8IWZ5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.25■■□□□ 1.31
TRIM42Q8IWZ5 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM42Q8IWZ5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM42Q8IWZ5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM42Q8IWZ5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.25■■□□□ 1.31
TRIM42Q8IWZ5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM42Q8IWZ5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.24■■□□□ 1.31
TRIM42Q8IWZ5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM42Q8IWZ5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM42Q8IWZ5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.23■■□□□ 1.31
TRIM42Q8IWZ5 MIR639-201ENST00000384974 98 ntBASIC23.23■■□□□ 1.31
TRIM42Q8IWZ5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM42Q8IWZ5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM42Q8IWZ5 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.22■■□□□ 1.31
TRIM42Q8IWZ5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM42Q8IWZ5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.21■■□□□ 1.31
TRIM42Q8IWZ5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM42Q8IWZ5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM42Q8IWZ5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.21■■□□□ 1.31
TRIM42Q8IWZ5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM42Q8IWZ5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM42Q8IWZ5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM42Q8IWZ5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM42Q8IWZ5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM42Q8IWZ5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM42Q8IWZ5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIM42Q8IWZ5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
TRIM42Q8IWZ5 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM42Q8IWZ5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
TRIM42Q8IWZ5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM42Q8IWZ5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
TRIM42Q8IWZ5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
TRIM42Q8IWZ5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
TRIM42Q8IWZ5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.19■■□□□ 1.3
TRIM42Q8IWZ5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM42Q8IWZ5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.19■■□□□ 1.3
TRIM42Q8IWZ5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
TRIM42Q8IWZ5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM42Q8IWZ5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM42Q8IWZ5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM42Q8IWZ5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.18■■□□□ 1.3
TRIM42Q8IWZ5 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
TRIM42Q8IWZ5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
TRIM42Q8IWZ5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.18■■□□□ 1.3
TRIM42Q8IWZ5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM42Q8IWZ5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM42Q8IWZ5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM42Q8IWZ5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
TRIM42Q8IWZ5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM42Q8IWZ5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM42Q8IWZ5 ABCB10P4-201ENST00000566803 2184 ntBASIC23.17■■□□□ 1.3
TRIM42Q8IWZ5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.17■■□□□ 1.3
TRIM42Q8IWZ5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM42Q8IWZ5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM42Q8IWZ5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM42Q8IWZ5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM42Q8IWZ5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM42Q8IWZ5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms