Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
LAPTM4BQ86VI4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LAPTM4BQ86VI4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LAPTM4BQ86VI4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LAPTM4BQ86VI4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LAPTM4BQ86VI4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LAPTM4BQ86VI4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
LAPTM4BQ86VI4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LAPTM4BQ86VI4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LAPTM4BQ86VI4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LAPTM4BQ86VI4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LAPTM4BQ86VI4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LAPTM4BQ86VI4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LAPTM4BQ86VI4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LAPTM4BQ86VI4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.28■■□□□ 1.16
LAPTM4BQ86VI4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
LAPTM4BQ86VI4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.28■■□□□ 1.16
LAPTM4BQ86VI4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
LAPTM4BQ86VI4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
LAPTM4BQ86VI4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
LAPTM4BQ86VI4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LAPTM4BQ86VI4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
LAPTM4BQ86VI4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
LAPTM4BQ86VI4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LAPTM4BQ86VI4 KRT18P24-201ENST00000344739 1156 ntBASIC22.27■■□□□ 1.16
LAPTM4BQ86VI4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LAPTM4BQ86VI4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.27■■□□□ 1.16
LAPTM4BQ86VI4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.27■■□□□ 1.16
LAPTM4BQ86VI4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LAPTM4BQ86VI4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LAPTM4BQ86VI4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
LAPTM4BQ86VI4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.26■■□□□ 1.15
LAPTM4BQ86VI4 AC097639.1-201ENST00000565519 1891 ntBASIC22.26■■□□□ 1.15
LAPTM4BQ86VI4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LAPTM4BQ86VI4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.26■■□□□ 1.15
LAPTM4BQ86VI4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LAPTM4BQ86VI4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LAPTM4BQ86VI4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LAPTM4BQ86VI4 AL592295.1-201ENST00000400984 884 ntBASIC22.26■■□□□ 1.15
LAPTM4BQ86VI4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.26■■□□□ 1.15
LAPTM4BQ86VI4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
LAPTM4BQ86VI4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.25■■□□□ 1.15
LAPTM4BQ86VI4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LAPTM4BQ86VI4 AC120024.1-201ENST00000562672 995 ntBASIC22.25■■□□□ 1.15
LAPTM4BQ86VI4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.25■■□□□ 1.15
LAPTM4BQ86VI4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.25■■□□□ 1.15
LAPTM4BQ86VI4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LAPTM4BQ86VI4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.25■■□□□ 1.15
LAPTM4BQ86VI4 DUSP8P4-201ENST00000399538 1761 ntBASIC22.25■■□□□ 1.15
LAPTM4BQ86VI4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
LAPTM4BQ86VI4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.24■■□□□ 1.15
LAPTM4BQ86VI4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
LAPTM4BQ86VI4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.24■■□□□ 1.15
LAPTM4BQ86VI4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.24■■□□□ 1.15
LAPTM4BQ86VI4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.24■■□□□ 1.15
LAPTM4BQ86VI4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LAPTM4BQ86VI4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LAPTM4BQ86VI4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LAPTM4BQ86VI4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LAPTM4BQ86VI4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LAPTM4BQ86VI4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LAPTM4BQ86VI4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LAPTM4BQ86VI4 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.23■■□□□ 1.15
LAPTM4BQ86VI4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LAPTM4BQ86VI4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
LAPTM4BQ86VI4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
LAPTM4BQ86VI4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LAPTM4BQ86VI4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
LAPTM4BQ86VI4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.22■■□□□ 1.15
LAPTM4BQ86VI4 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.22■■□□□ 1.15
LAPTM4BQ86VI4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LAPTM4BQ86VI4 THA1P-201ENST00000590384 1145 ntBASIC22.22■■□□□ 1.15
LAPTM4BQ86VI4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LAPTM4BQ86VI4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
LAPTM4BQ86VI4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
LAPTM4BQ86VI4 FOXO3B-201ENST00000395675 1928 ntBASIC22.21■■□□□ 1.15
LAPTM4BQ86VI4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
LAPTM4BQ86VI4 AC093323.1-202ENST00000635031 2045 ntBASIC22.21■■□□□ 1.15
LAPTM4BQ86VI4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LAPTM4BQ86VI4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
LAPTM4BQ86VI4 AC239859.2-201ENST00000444165 318 ntBASIC22.21■■□□□ 1.15
LAPTM4BQ86VI4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.21■■□□□ 1.15
LAPTM4BQ86VI4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LAPTM4BQ86VI4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LAPTM4BQ86VI4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LAPTM4BQ86VI4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
LAPTM4BQ86VI4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.2■■□□□ 1.14
LAPTM4BQ86VI4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
LAPTM4BQ86VI4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LAPTM4BQ86VI4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LAPTM4BQ86VI4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LAPTM4BQ86VI4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.2■■□□□ 1.14
LAPTM4BQ86VI4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.2■■□□□ 1.14
LAPTM4BQ86VI4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LAPTM4BQ86VI4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LAPTM4BQ86VI4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.19■■□□□ 1.14
LAPTM4BQ86VI4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LAPTM4BQ86VI4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LAPTM4BQ86VI4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
LAPTM4BQ86VI4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms