Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.39■■□□□ 1.02
CHMP1BQ7LBR1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.39■■□□□ 1.01
CHMP1BQ7LBR1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CHMP1BQ7LBR1 AC022616.5-201ENST00000518796 181 ntBASIC21.39■■□□□ 1.01
CHMP1BQ7LBR1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHMP1BQ7LBR1 AC093323.1-202ENST00000635031 2045 ntBASIC21.39■■□□□ 1.01
CHMP1BQ7LBR1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.39■■□□□ 1.01
CHMP1BQ7LBR1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHMP1BQ7LBR1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.38■■□□□ 1.01
CHMP1BQ7LBR1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHMP1BQ7LBR1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHMP1BQ7LBR1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.38■■□□□ 1.01
CHMP1BQ7LBR1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHMP1BQ7LBR1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHMP1BQ7LBR1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.38■■□□□ 1.01
CHMP1BQ7LBR1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHMP1BQ7LBR1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHMP1BQ7LBR1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHMP1BQ7LBR1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHMP1BQ7LBR1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CHMP1BQ7LBR1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CHMP1BQ7LBR1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHMP1BQ7LBR1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHMP1BQ7LBR1 AC103834.1-201ENST00000520383 144 ntBASIC21.37■■□□□ 1.01
CHMP1BQ7LBR1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.37■■□□□ 1.01
CHMP1BQ7LBR1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHMP1BQ7LBR1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
CHMP1BQ7LBR1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHMP1BQ7LBR1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CHMP1BQ7LBR1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHMP1BQ7LBR1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP1BQ7LBR1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP1BQ7LBR1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP1BQ7LBR1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CHMP1BQ7LBR1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.36■■□□□ 1.01
CHMP1BQ7LBR1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP1BQ7LBR1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.36■■□□□ 1.01
CHMP1BQ7LBR1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP1BQ7LBR1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CHMP1BQ7LBR1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.36■■□□□ 1.01
CHMP1BQ7LBR1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP1BQ7LBR1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP1BQ7LBR1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CHMP1BQ7LBR1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CHMP1BQ7LBR1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP1BQ7LBR1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP1BQ7LBR1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CHMP1BQ7LBR1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.34■■□□□ 1.01
CHMP1BQ7LBR1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP1BQ7LBR1 AL031848.2-201ENST00000607670 837 ntBASIC21.34■■□□□ 1.01
CHMP1BQ7LBR1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.34■■□□□ 1.01
CHMP1BQ7LBR1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP1BQ7LBR1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.34■■□□□ 1.01
CHMP1BQ7LBR1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.34■■□□□ 1.01
CHMP1BQ7LBR1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP1BQ7LBR1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP1BQ7LBR1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP1BQ7LBR1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CHMP1BQ7LBR1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CHMP1BQ7LBR1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.33■■□□□ 1
CHMP1BQ7LBR1 AC145676.1-201ENST00000514988 2004 ntBASIC21.33■■□□□ 1
CHMP1BQ7LBR1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP1BQ7LBR1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
CHMP1BQ7LBR1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP1BQ7LBR1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.32■■□□□ 1
CHMP1BQ7LBR1 AL592295.1-201ENST00000400984 884 ntBASIC21.32■■□□□ 1
CHMP1BQ7LBR1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.32■■□□□ 1
CHMP1BQ7LBR1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.32■■□□□ 1
CHMP1BQ7LBR1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP1BQ7LBR1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP1BQ7LBR1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.31■■□□□ 1
CHMP1BQ7LBR1 AC092803.2-201ENST00000564287 1899 ntBASIC21.31■■□□□ 1
CHMP1BQ7LBR1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP1BQ7LBR1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CHMP1BQ7LBR1 AC103724.3-201ENST00000564481 992 ntBASIC21.31■■□□□ 1
CHMP1BQ7LBR1 AC020928.2-201ENST00000588717 2197 ntBASIC21.31■■□□□ 1
CHMP1BQ7LBR1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CHMP1BQ7LBR1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP1BQ7LBR1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP1BQ7LBR1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP1BQ7LBR1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.31■■□□□ 1
CHMP1BQ7LBR1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CHMP1BQ7LBR1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.31■■□□□ 1
CHMP1BQ7LBR1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP1BQ7LBR1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP1BQ7LBR1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CHMP1BQ7LBR1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.3■■□□□ 1
CHMP1BQ7LBR1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.3■■□□□ 1
CHMP1BQ7LBR1 ERN1-208ENST00000606895 2068 ntBASIC21.3■■□□□ 1
CHMP1BQ7LBR1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP1BQ7LBR1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP1BQ7LBR1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.29■■□□□ 1
CHMP1BQ7LBR1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP1BQ7LBR1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP1BQ7LBR1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP1BQ7LBR1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP1BQ7LBR1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP1BQ7LBR1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CHMP1BQ7LBR1 AL451085.2-201ENST00000605085 799 ntBASIC21.29■■□□□ 1
CHMP1BQ7LBR1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms