Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NIPAL1Q6NVV3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NIPAL1Q6NVV3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
NIPAL1Q6NVV3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
NIPAL1Q6NVV3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NIPAL1Q6NVV3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NIPAL1Q6NVV3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.51■■□□□ 1.19
NIPAL1Q6NVV3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NIPAL1Q6NVV3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NIPAL1Q6NVV3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
NIPAL1Q6NVV3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NIPAL1Q6NVV3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
NIPAL1Q6NVV3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NIPAL1Q6NVV3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NIPAL1Q6NVV3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.5■■□□□ 1.19
NIPAL1Q6NVV3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NIPAL1Q6NVV3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NIPAL1Q6NVV3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NIPAL1Q6NVV3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.5■■□□□ 1.19
NIPAL1Q6NVV3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NIPAL1Q6NVV3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NIPAL1Q6NVV3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NIPAL1Q6NVV3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.49■■□□□ 1.19
NIPAL1Q6NVV3 AL592295.1-201ENST00000400984 884 ntBASIC22.49■■□□□ 1.19
NIPAL1Q6NVV3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.49■■□□□ 1.19
NIPAL1Q6NVV3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.49■■□□□ 1.19
NIPAL1Q6NVV3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
NIPAL1Q6NVV3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
NIPAL1Q6NVV3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NIPAL1Q6NVV3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NIPAL1Q6NVV3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
NIPAL1Q6NVV3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.48■■□□□ 1.19
NIPAL1Q6NVV3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
NIPAL1Q6NVV3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NIPAL1Q6NVV3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NIPAL1Q6NVV3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NIPAL1Q6NVV3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.48■■□□□ 1.19
NIPAL1Q6NVV3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NIPAL1Q6NVV3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.48■■□□□ 1.19
NIPAL1Q6NVV3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NIPAL1Q6NVV3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.48■■□□□ 1.19
NIPAL1Q6NVV3 AC012676.1-201ENST00000574705 1949 ntBASIC22.47■■□□□ 1.19
NIPAL1Q6NVV3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NIPAL1Q6NVV3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NIPAL1Q6NVV3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NIPAL1Q6NVV3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NIPAL1Q6NVV3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NIPAL1Q6NVV3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NIPAL1Q6NVV3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NIPAL1Q6NVV3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
NIPAL1Q6NVV3 AC010980.1-201ENST00000587192 1142 ntBASIC22.46■■□□□ 1.19
NIPAL1Q6NVV3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NIPAL1Q6NVV3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.46■■□□□ 1.19
NIPAL1Q6NVV3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NIPAL1Q6NVV3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.19
NIPAL1Q6NVV3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NIPAL1Q6NVV3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
NIPAL1Q6NVV3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
NIPAL1Q6NVV3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
NIPAL1Q6NVV3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
NIPAL1Q6NVV3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
NIPAL1Q6NVV3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
NIPAL1Q6NVV3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NIPAL1Q6NVV3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
NIPAL1Q6NVV3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NIPAL1Q6NVV3 YBX1P4-201ENST00000392794 808 ntBASIC22.44■■□□□ 1.18
NIPAL1Q6NVV3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.44■■□□□ 1.18
NIPAL1Q6NVV3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
NIPAL1Q6NVV3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
NIPAL1Q6NVV3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NIPAL1Q6NVV3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NIPAL1Q6NVV3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NIPAL1Q6NVV3 MIR4508-201ENST00000584178 70 ntBASIC22.44■■□□□ 1.18
NIPAL1Q6NVV3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.44■■□□□ 1.18
NIPAL1Q6NVV3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
NIPAL1Q6NVV3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NIPAL1Q6NVV3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NIPAL1Q6NVV3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NIPAL1Q6NVV3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.43■■□□□ 1.18
NIPAL1Q6NVV3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.43■■□□□ 1.18
NIPAL1Q6NVV3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.43■■□□□ 1.18
NIPAL1Q6NVV3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.43■■□□□ 1.18
NIPAL1Q6NVV3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NIPAL1Q6NVV3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.43■■□□□ 1.18
NIPAL1Q6NVV3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NIPAL1Q6NVV3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.43■■□□□ 1.18
NIPAL1Q6NVV3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
NIPAL1Q6NVV3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NIPAL1Q6NVV3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NIPAL1Q6NVV3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
NIPAL1Q6NVV3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NIPAL1Q6NVV3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NIPAL1Q6NVV3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.41■■□□□ 1.18
NIPAL1Q6NVV3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NIPAL1Q6NVV3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.41■■□□□ 1.18
NIPAL1Q6NVV3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.41■■□□□ 1.18
NIPAL1Q6NVV3 FOXO3B-201ENST00000395675 1928 ntBASIC22.41■■□□□ 1.18
NIPAL1Q6NVV3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.4■■□□□ 1.18
NIPAL1Q6NVV3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NIPAL1Q6NVV3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms