Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
KRT40Q6A162 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
KRT40Q6A162 AC087393.1-201ENST00000582896 145 ntBASIC27.2■■□□□ 1.94
KRT40Q6A162 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
KRT40Q6A162 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
KRT40Q6A162 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
KRT40Q6A162 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
KRT40Q6A162 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC27.19■■□□□ 1.94
KRT40Q6A162 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.19■■□□□ 1.94
KRT40Q6A162 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
KRT40Q6A162 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
KRT40Q6A162 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
KRT40Q6A162 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
KRT40Q6A162 MIR6089-201ENST00000616698 64 ntBASIC27.18■■□□□ 1.94
KRT40Q6A162 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC27.17■■□□□ 1.94
KRT40Q6A162 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
KRT40Q6A162 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
KRT40Q6A162 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC27.17■■□□□ 1.94
KRT40Q6A162 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
KRT40Q6A162 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC27.17■■□□□ 1.94
KRT40Q6A162 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
KRT40Q6A162 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
KRT40Q6A162 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.16■■□□□ 1.94
KRT40Q6A162 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC27.16■■□□□ 1.94
KRT40Q6A162 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
KRT40Q6A162 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
KRT40Q6A162 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.16■■□□□ 1.94
KRT40Q6A162 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
KRT40Q6A162 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
KRT40Q6A162 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
KRT40Q6A162 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
KRT40Q6A162 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC27.16■■□□□ 1.94
KRT40Q6A162 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
KRT40Q6A162 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
KRT40Q6A162 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
KRT40Q6A162 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
KRT40Q6A162 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
KRT40Q6A162 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC27.15■■□□□ 1.94
KRT40Q6A162 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
KRT40Q6A162 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
KRT40Q6A162 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.15■■□□□ 1.94
KRT40Q6A162 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC27.15■■□□□ 1.94
KRT40Q6A162 AC093323.1-202ENST00000635031 2045 ntBASIC27.15■■□□□ 1.94
KRT40Q6A162 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
KRT40Q6A162 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC27.15■■□□□ 1.94
KRT40Q6A162 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
KRT40Q6A162 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
KRT40Q6A162 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
KRT40Q6A162 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
KRT40Q6A162 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.14■■□□□ 1.94
KRT40Q6A162 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
KRT40Q6A162 AC131212.1-201ENST00000613771 668 ntBASIC27.14■■□□□ 1.94
KRT40Q6A162 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC27.14■■□□□ 1.94
KRT40Q6A162 LSR-205ENST00000427250 1606 ntTSL 2 BASIC27.14■■□□□ 1.94
KRT40Q6A162 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
KRT40Q6A162 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.93
KRT40Q6A162 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
KRT40Q6A162 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.13■■□□□ 1.93
KRT40Q6A162 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC27.13■■□□□ 1.93
KRT40Q6A162 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
KRT40Q6A162 KRT8P33-201ENST00000508125 1423 ntBASIC27.13■■□□□ 1.93
KRT40Q6A162 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
KRT40Q6A162 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
KRT40Q6A162 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
KRT40Q6A162 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
KRT40Q6A162 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
KRT40Q6A162 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
KRT40Q6A162 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
KRT40Q6A162 EED-207ENST00000528180 1745 ntTSL 5 BASIC27.12■■□□□ 1.93
KRT40Q6A162 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC27.12■■□□□ 1.93
KRT40Q6A162 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
KRT40Q6A162 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
KRT40Q6A162 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC27.11■■□□□ 1.93
KRT40Q6A162 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.11■■□□□ 1.93
KRT40Q6A162 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
KRT40Q6A162 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
KRT40Q6A162 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
KRT40Q6A162 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
KRT40Q6A162 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
KRT40Q6A162 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
KRT40Q6A162 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.1■■□□□ 1.93
KRT40Q6A162 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.1■■□□□ 1.93
KRT40Q6A162 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
KRT40Q6A162 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.09■■□□□ 1.93
KRT40Q6A162 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
KRT40Q6A162 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.09■■□□□ 1.93
KRT40Q6A162 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
KRT40Q6A162 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC27.09■■□□□ 1.93
KRT40Q6A162 AC010980.1-201ENST00000587192 1142 ntBASIC27.09■■□□□ 1.93
KRT40Q6A162 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC27.09■■□□□ 1.93
KRT40Q6A162 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.09■■□□□ 1.93
KRT40Q6A162 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
KRT40Q6A162 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
KRT40Q6A162 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
KRT40Q6A162 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
KRT40Q6A162 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
KRT40Q6A162 AC009299.2-201ENST00000482477 511 ntBASIC27.07■■□□□ 1.92
KRT40Q6A162 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
KRT40Q6A162 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC27.07■■□□□ 1.92
KRT40Q6A162 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms