Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC27.33■■□□□ 1.97
COL13A1Q5TAT6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC27.33■■□□□ 1.97
COL13A1Q5TAT6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC27.33■■□□□ 1.97
COL13A1Q5TAT6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL13A1Q5TAT6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
COL13A1Q5TAT6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC27.32■■□□□ 1.96
COL13A1Q5TAT6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL13A1Q5TAT6 AC080038.1-201ENST00000611274 1154 ntBASIC27.32■■□□□ 1.96
COL13A1Q5TAT6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC27.32■■□□□ 1.96
COL13A1Q5TAT6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC27.32■■□□□ 1.96
COL13A1Q5TAT6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL13A1Q5TAT6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
COL13A1Q5TAT6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC27.31■■□□□ 1.96
COL13A1Q5TAT6 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.31■■□□□ 1.96
COL13A1Q5TAT6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL13A1Q5TAT6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
COL13A1Q5TAT6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL13A1Q5TAT6 RAP2CP1-201ENST00000605103 478 ntBASIC27.3■■□□□ 1.96
COL13A1Q5TAT6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
COL13A1Q5TAT6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
COL13A1Q5TAT6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
COL13A1Q5TAT6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.29■■□□□ 1.96
COL13A1Q5TAT6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.29■■□□□ 1.96
COL13A1Q5TAT6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL13A1Q5TAT6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.28■■□□□ 1.96
COL13A1Q5TAT6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC27.28■■□□□ 1.96
COL13A1Q5TAT6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
COL13A1Q5TAT6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC27.28■■□□□ 1.96
COL13A1Q5TAT6 AL499627.2-201ENST00000606283 725 ntBASIC27.28■■□□□ 1.96
COL13A1Q5TAT6 MAP2K4P1-201ENST00000438453 1195 ntBASIC27.27■■□□□ 1.96
COL13A1Q5TAT6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC27.27■■□□□ 1.96
COL13A1Q5TAT6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
COL13A1Q5TAT6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
COL13A1Q5TAT6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC27.26■■□□□ 1.95
COL13A1Q5TAT6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC27.26■■□□□ 1.95
COL13A1Q5TAT6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC27.26■■□□□ 1.95
COL13A1Q5TAT6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC27.26■■□□□ 1.95
COL13A1Q5TAT6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
COL13A1Q5TAT6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC27.25■■□□□ 1.95
COL13A1Q5TAT6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC27.25■■□□□ 1.95
COL13A1Q5TAT6 NTF6G-201ENST00000591094 616 ntBASIC27.25■■□□□ 1.95
COL13A1Q5TAT6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
COL13A1Q5TAT6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL13A1Q5TAT6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
COL13A1Q5TAT6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
COL13A1Q5TAT6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL13A1Q5TAT6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL13A1Q5TAT6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL13A1Q5TAT6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL13A1Q5TAT6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC27.24■■□□□ 1.95
COL13A1Q5TAT6 AC100797.4-201ENST00000631653 1827 ntBASIC27.24■■□□□ 1.95
COL13A1Q5TAT6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
COL13A1Q5TAT6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
COL13A1Q5TAT6 SERBP1P1-201ENST00000396021 1160 ntBASIC27.23■■□□□ 1.95
COL13A1Q5TAT6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC27.23■■□□□ 1.95
COL13A1Q5TAT6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL13A1Q5TAT6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL13A1Q5TAT6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC27.22■■□□□ 1.95
COL13A1Q5TAT6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL13A1Q5TAT6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL13A1Q5TAT6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
COL13A1Q5TAT6 AL109923.1-201ENST00000618799 583 ntBASIC27.22■■□□□ 1.95
COL13A1Q5TAT6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL13A1Q5TAT6 CDCA4P2-201ENST00000441182 718 ntBASIC27.21■■□□□ 1.95
COL13A1Q5TAT6 PPP1R14BP3-201ENST00000509033 445 ntBASIC27.21■■□□□ 1.95
COL13A1Q5TAT6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC27.21■■□□□ 1.95
COL13A1Q5TAT6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC27.21■■□□□ 1.95
COL13A1Q5TAT6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL13A1Q5TAT6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC27.21■■□□□ 1.95
COL13A1Q5TAT6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL13A1Q5TAT6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
COL13A1Q5TAT6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC27.2■■□□□ 1.94
COL13A1Q5TAT6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
COL13A1Q5TAT6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
COL13A1Q5TAT6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC27.2■■□□□ 1.94
COL13A1Q5TAT6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC27.2■■□□□ 1.94
COL13A1Q5TAT6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.2■■□□□ 1.94
COL13A1Q5TAT6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC27.19■■□□□ 1.94
COL13A1Q5TAT6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
COL13A1Q5TAT6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC27.19■■□□□ 1.94
COL13A1Q5TAT6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL13A1Q5TAT6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL13A1Q5TAT6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL13A1Q5TAT6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL13A1Q5TAT6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL13A1Q5TAT6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC27.18■■□□□ 1.94
COL13A1Q5TAT6 MIR6722-201ENST00000617286 78 ntBASIC27.18■■□□□ 1.94
COL13A1Q5TAT6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27.18■■□□□ 1.94
COL13A1Q5TAT6 AC026185.1-201ENST00000445748 174 ntBASIC27.17■■□□□ 1.94
COL13A1Q5TAT6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
COL13A1Q5TAT6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC27.17■■□□□ 1.94
COL13A1Q5TAT6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.17■■□□□ 1.94
COL13A1Q5TAT6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL13A1Q5TAT6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL13A1Q5TAT6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
COL13A1Q5TAT6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC27.16■■□□□ 1.94
COL13A1Q5TAT6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC27.16■■□□□ 1.94
COL13A1Q5TAT6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC27.16■■□□□ 1.94
COL13A1Q5TAT6 AF131216.4-201ENST00000638924 1588 ntBASIC27.16■■□□□ 1.94
COL13A1Q5TAT6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 230.2 ms