Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.25□□□□□ -0.29
UBR4Q5T4S7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBR4Q5T4S7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.25□□□□□ -0.29
UBR4Q5T4S7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.25□□□□□ -0.29
UBR4Q5T4S7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBR4Q5T4S7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBR4Q5T4S7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBR4Q5T4S7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
UBR4Q5T4S7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
UBR4Q5T4S7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC13.25□□□□□ -0.29
UBR4Q5T4S7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBR4Q5T4S7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.24□□□□□ -0.29
UBR4Q5T4S7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.24□□□□□ -0.29
UBR4Q5T4S7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
UBR4Q5T4S7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC13.24□□□□□ -0.29
UBR4Q5T4S7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC13.24□□□□□ -0.29
UBR4Q5T4S7 AC010331.1-201ENST00000611423 582 ntBASIC13.24□□□□□ -0.29
UBR4Q5T4S7 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.24□□□□□ -0.29
UBR4Q5T4S7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBR4Q5T4S7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC13.24□□□□□ -0.29
UBR4Q5T4S7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.24□□□□□ -0.29
UBR4Q5T4S7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBR4Q5T4S7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBR4Q5T4S7 SYT6-210ENST00000641643 1587 ntBASIC13.23□□□□□ -0.29
UBR4Q5T4S7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC13.23□□□□□ -0.29
UBR4Q5T4S7 AC123595.1-201ENST00000440769 1046 ntBASIC13.23□□□□□ -0.29
UBR4Q5T4S7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.23□□□□□ -0.29
UBR4Q5T4S7 AC080038.1-201ENST00000611274 1154 ntBASIC13.23□□□□□ -0.29
UBR4Q5T4S7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBR4Q5T4S7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
UBR4Q5T4S7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBR4Q5T4S7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBR4Q5T4S7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
UBR4Q5T4S7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBR4Q5T4S7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
UBR4Q5T4S7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBR4Q5T4S7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBR4Q5T4S7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC13.22□□□□□ -0.29
UBR4Q5T4S7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC13.22□□□□□ -0.29
UBR4Q5T4S7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBR4Q5T4S7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBR4Q5T4S7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC13.22□□□□□ -0.29
UBR4Q5T4S7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC13.22□□□□□ -0.29
UBR4Q5T4S7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.22□□□□□ -0.29
UBR4Q5T4S7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC13.21□□□□□ -0.29
UBR4Q5T4S7 AC011551.1-201ENST00000614101 683 ntBASIC13.21□□□□□ -0.29
UBR4Q5T4S7 SF1-220ENST00000626028 704 ntTSL 2 BASIC13.21□□□□□ -0.29
UBR4Q5T4S7 AC073111.5-205ENST00000641717 521 ntBASIC13.21□□□□□ -0.29
UBR4Q5T4S7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBR4Q5T4S7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.21□□□□□ -0.29
UBR4Q5T4S7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBR4Q5T4S7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
UBR4Q5T4S7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC13.21□□□□□ -0.29
UBR4Q5T4S7 SERBP1P1-201ENST00000396021 1160 ntBASIC13.21□□□□□ -0.3
UBR4Q5T4S7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.21□□□□□ -0.3
UBR4Q5T4S7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBR4Q5T4S7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBR4Q5T4S7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBR4Q5T4S7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBR4Q5T4S7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBR4Q5T4S7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBR4Q5T4S7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBR4Q5T4S7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.19□□□□□ -0.3
UBR4Q5T4S7 AL109923.1-201ENST00000618799 583 ntBASIC13.19□□□□□ -0.3
UBR4Q5T4S7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
UBR4Q5T4S7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBR4Q5T4S7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBR4Q5T4S7 AL596275.1-201ENST00000423464 877 ntBASIC13.19□□□□□ -0.3
UBR4Q5T4S7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
UBR4Q5T4S7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
UBR4Q5T4S7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
UBR4Q5T4S7 AC026185.1-201ENST00000445748 174 ntBASIC13.19□□□□□ -0.3
UBR4Q5T4S7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.19□□□□□ -0.3
UBR4Q5T4S7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.19□□□□□ -0.3
UBR4Q5T4S7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBR4Q5T4S7 FAM210CP-201ENST00000445714 574 ntBASIC13.18□□□□□ -0.3
UBR4Q5T4S7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 AC008764.7-201ENST00000593779 1081 ntBASIC13.18□□□□□ -0.3
UBR4Q5T4S7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 GAK-223ENST00000628912 497 ntTSL 5 BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBR4Q5T4S7 AC004448.1-201ENST00000458332 883 ntBASIC13.17□□□□□ -0.3
UBR4Q5T4S7 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms