Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC142472.1-201ENST00000612013 1741 ntBASIC39.22■■■■□ 3.87
SNAPC4Q5SXM2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC39.2■■■■□ 3.87
SNAPC4Q5SXM2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
SNAPC4Q5SXM2 AC091305.1-201ENST00000479476 895 ntBASIC39.19■■■■□ 3.86
SNAPC4Q5SXM2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC39.19■■■■□ 3.86
SNAPC4Q5SXM2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC39.19■■■■□ 3.86
SNAPC4Q5SXM2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC39.19■■■■□ 3.86
SNAPC4Q5SXM2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC39.18■■■■□ 3.86
SNAPC4Q5SXM2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC39.18■■■■□ 3.86
SNAPC4Q5SXM2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC39.18■■■■□ 3.86
SNAPC4Q5SXM2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC39.17■■■■□ 3.86
SNAPC4Q5SXM2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC39.17■■■■□ 3.86
SNAPC4Q5SXM2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
SNAPC4Q5SXM2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC39.17■■■■□ 3.86
SNAPC4Q5SXM2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC39.16■■■■□ 3.86
SNAPC4Q5SXM2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
SNAPC4Q5SXM2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
SNAPC4Q5SXM2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC39.15■■■■□ 3.86
SNAPC4Q5SXM2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC39.15■■■■□ 3.86
SNAPC4Q5SXM2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC39.14■■■■□ 3.86
SNAPC4Q5SXM2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC39.14■■■■□ 3.86
SNAPC4Q5SXM2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC39.14■■■■□ 3.86
SNAPC4Q5SXM2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC39.14■■■■□ 3.86
SNAPC4Q5SXM2 AC090192.1-201ENST00000517740 490 ntBASIC39.13■■■■□ 3.85
SNAPC4Q5SXM2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC39.13■■■■□ 3.85
SNAPC4Q5SXM2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC39.13■■■■□ 3.85
SNAPC4Q5SXM2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC39.13■■■■□ 3.85
SNAPC4Q5SXM2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC39.13■■■■□ 3.85
SNAPC4Q5SXM2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC39.12■■■■□ 3.85
SNAPC4Q5SXM2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC39.12■■■■□ 3.85
SNAPC4Q5SXM2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC39.12■■■■□ 3.85
SNAPC4Q5SXM2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC39.12■■■■□ 3.85
SNAPC4Q5SXM2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
SNAPC4Q5SXM2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC39.11■■■■□ 3.85
SNAPC4Q5SXM2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
SNAPC4Q5SXM2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC39.11■■■■□ 3.85
SNAPC4Q5SXM2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
SNAPC4Q5SXM2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC39.11■■■■□ 3.85
SNAPC4Q5SXM2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC39.1■■■■□ 3.85
SNAPC4Q5SXM2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
SNAPC4Q5SXM2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC39.09■■■■□ 3.85
SNAPC4Q5SXM2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
SNAPC4Q5SXM2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
SNAPC4Q5SXM2 SF1-220ENST00000626028 704 ntTSL 2 BASIC39.07■■■■□ 3.85
SNAPC4Q5SXM2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC39.07■■■■□ 3.84
SNAPC4Q5SXM2 MIR4767-201ENST00000582827 78 ntBASIC39.06■■■■□ 3.84
SNAPC4Q5SXM2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC39.06■■■■□ 3.84
SNAPC4Q5SXM2 RARRES2P11-201ENST00000635158 484 ntBASIC39.06■■■■□ 3.84
SNAPC4Q5SXM2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC39.06■■■■□ 3.84
SNAPC4Q5SXM2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
SNAPC4Q5SXM2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
SNAPC4Q5SXM2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC39.06■■■■□ 3.84
SNAPC4Q5SXM2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
SNAPC4Q5SXM2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
SNAPC4Q5SXM2 MAG-206ENST00000597035 542 ntTSL 4 BASIC39.05■■■■□ 3.84
SNAPC4Q5SXM2 CA15P2-201ENST00000611168 834 ntBASIC39.05■■■■□ 3.84
SNAPC4Q5SXM2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC39.05■■■■□ 3.84
SNAPC4Q5SXM2 DRD5P2-201ENST00000421395 2012 ntBASIC39.04■■■■□ 3.84
SNAPC4Q5SXM2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC39.04■■■■□ 3.84
SNAPC4Q5SXM2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
SNAPC4Q5SXM2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC39.04■■■■□ 3.84
SNAPC4Q5SXM2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
SNAPC4Q5SXM2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC39.04■■■■□ 3.84
SNAPC4Q5SXM2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC39.04■■■■□ 3.84
SNAPC4Q5SXM2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC39.03■■■■□ 3.84
SNAPC4Q5SXM2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
SNAPC4Q5SXM2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
SNAPC4Q5SXM2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC39.02■■■■□ 3.84
SNAPC4Q5SXM2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC39.01■■■■□ 3.84
SNAPC4Q5SXM2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC39.01■■■■□ 3.83
SNAPC4Q5SXM2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
SNAPC4Q5SXM2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC39■■■■□ 3.83
SNAPC4Q5SXM2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC39■■■■□ 3.83
SNAPC4Q5SXM2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC38.99■■■■□ 3.83
SNAPC4Q5SXM2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC38.99■■■■□ 3.83
SNAPC4Q5SXM2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
SNAPC4Q5SXM2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
SNAPC4Q5SXM2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
SNAPC4Q5SXM2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
SNAPC4Q5SXM2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC38.98■■■■□ 3.83
SNAPC4Q5SXM2 LINC01003-201ENST00000564834 1764 ntBASIC38.97■■■■□ 3.83
SNAPC4Q5SXM2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC38.97■■■■□ 3.83
SNAPC4Q5SXM2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC38.97■■■■□ 3.83
SNAPC4Q5SXM2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC38.97■■■■□ 3.83
SNAPC4Q5SXM2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC38.97■■■■□ 3.83
SNAPC4Q5SXM2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC38.96■■■■□ 3.83
SNAPC4Q5SXM2 RASA4CP-201ENST00000424092 1398 ntBASIC38.96■■■■□ 3.83
SNAPC4Q5SXM2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC38.96■■■■□ 3.83
SNAPC4Q5SXM2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
SNAPC4Q5SXM2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
SNAPC4Q5SXM2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC38.96■■■■□ 3.83
SNAPC4Q5SXM2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC38.95■■■■□ 3.83
SNAPC4Q5SXM2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC38.95■■■■□ 3.83
SNAPC4Q5SXM2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC38.95■■■■□ 3.83
SNAPC4Q5SXM2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC38.95■■■■□ 3.83
SNAPC4Q5SXM2 AC027682.1-201ENST00000562846 899 ntBASIC38.95■■■■□ 3.83
SNAPC4Q5SXM2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC38.95■■■■□ 3.83
SNAPC4Q5SXM2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC38.94■■■■□ 3.82
SNAPC4Q5SXM2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
SNAPC4Q5SXM2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms