Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
TTC39AQ5SRH9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.68■■■□□ 2.18
TTC39AQ5SRH9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
TTC39AQ5SRH9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC28.67■■■□□ 2.18
TTC39AQ5SRH9 HES6-204ENST00000409182 863 ntTSL 2 BASIC28.67■■■□□ 2.18
TTC39AQ5SRH9 OR2A1-AS1-204ENST00000470435 602 ntBASIC28.67■■■□□ 2.18
TTC39AQ5SRH9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TTC39AQ5SRH9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC28.67■■■□□ 2.18
TTC39AQ5SRH9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TTC39AQ5SRH9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC28.66■■■□□ 2.18
TTC39AQ5SRH9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
TTC39AQ5SRH9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
TTC39AQ5SRH9 BX664725.1-201ENST00000438252 379 ntBASIC28.66■■■□□ 2.18
TTC39AQ5SRH9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.66■■■□□ 2.18
TTC39AQ5SRH9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
TTC39AQ5SRH9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC28.66■■■□□ 2.18
TTC39AQ5SRH9 AC090877.2-201ENST00000558441 1738 ntBASIC28.66■■■□□ 2.18
TTC39AQ5SRH9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
TTC39AQ5SRH9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
TTC39AQ5SRH9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
TTC39AQ5SRH9 Z92544.1-202ENST00000571933 1220 ntBASIC28.65■■■□□ 2.18
TTC39AQ5SRH9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
TTC39AQ5SRH9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TTC39AQ5SRH9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TTC39AQ5SRH9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC28.64■■■□□ 2.18
TTC39AQ5SRH9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
TTC39AQ5SRH9 AC137630.3-201ENST00000607245 391 ntBASIC28.64■■■□□ 2.18
TTC39AQ5SRH9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
TTC39AQ5SRH9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TTC39AQ5SRH9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TTC39AQ5SRH9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TTC39AQ5SRH9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TTC39AQ5SRH9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
TTC39AQ5SRH9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TTC39AQ5SRH9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TTC39AQ5SRH9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC28.62■■■□□ 2.17
TTC39AQ5SRH9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
TTC39AQ5SRH9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.61■■■□□ 2.17
TTC39AQ5SRH9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TTC39AQ5SRH9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TTC39AQ5SRH9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC28.61■■■□□ 2.17
TTC39AQ5SRH9 KRT125P-201ENST00000546827 989 ntBASIC28.61■■■□□ 2.17
TTC39AQ5SRH9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC28.61■■■□□ 2.17
TTC39AQ5SRH9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC28.61■■■□□ 2.17
TTC39AQ5SRH9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
TTC39AQ5SRH9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
TTC39AQ5SRH9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
TTC39AQ5SRH9 GUSBP5-201ENST00000418136 578 ntBASIC28.6■■■□□ 2.17
TTC39AQ5SRH9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC28.6■■■□□ 2.17
TTC39AQ5SRH9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC28.6■■■□□ 2.17
TTC39AQ5SRH9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.59■■■□□ 2.17
TTC39AQ5SRH9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.59■■■□□ 2.17
TTC39AQ5SRH9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
TTC39AQ5SRH9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
TTC39AQ5SRH9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
TTC39AQ5SRH9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TTC39AQ5SRH9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TTC39AQ5SRH9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
TTC39AQ5SRH9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC28.58■■■□□ 2.17
TTC39AQ5SRH9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.58■■■□□ 2.17
TTC39AQ5SRH9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
TTC39AQ5SRH9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
TTC39AQ5SRH9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
TTC39AQ5SRH9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC28.57■■■□□ 2.16
TTC39AQ5SRH9 MIR4787-201ENST00000607364 84 ntBASIC28.57■■■□□ 2.16
TTC39AQ5SRH9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TTC39AQ5SRH9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
TTC39AQ5SRH9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC28.57■■■□□ 2.16
TTC39AQ5SRH9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
TTC39AQ5SRH9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TTC39AQ5SRH9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC28.56■■■□□ 2.16
TTC39AQ5SRH9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.56■■■□□ 2.16
TTC39AQ5SRH9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC28.56■■■□□ 2.16
TTC39AQ5SRH9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TTC39AQ5SRH9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
TTC39AQ5SRH9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TTC39AQ5SRH9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC28.55■■■□□ 2.16
TTC39AQ5SRH9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TTC39AQ5SRH9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC28.55■■■□□ 2.16
TTC39AQ5SRH9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TTC39AQ5SRH9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TTC39AQ5SRH9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TTC39AQ5SRH9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC28.54■■■□□ 2.16
TTC39AQ5SRH9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
TTC39AQ5SRH9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TTC39AQ5SRH9 AC021242.3-201ENST00000607598 1377 ntBASIC28.54■■■□□ 2.16
TTC39AQ5SRH9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TTC39AQ5SRH9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC28.54■■■□□ 2.16
TTC39AQ5SRH9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TTC39AQ5SRH9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC28.54■■■□□ 2.16
TTC39AQ5SRH9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.54■■■□□ 2.16
TTC39AQ5SRH9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TTC39AQ5SRH9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TTC39AQ5SRH9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TTC39AQ5SRH9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TTC39AQ5SRH9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TTC39AQ5SRH9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TTC39AQ5SRH9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC28.52■■■□□ 2.16
TTC39AQ5SRH9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
TTC39AQ5SRH9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC28.52■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms