Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
SGO1Q5FBB7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.69■■□□□ 1.22
SGO1Q5FBB7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.69■■□□□ 1.22
SGO1Q5FBB7 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.68■■□□□ 1.22
SGO1Q5FBB7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SGO1Q5FBB7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SGO1Q5FBB7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SGO1Q5FBB7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.68■■□□□ 1.22
SGO1Q5FBB7 AL592293.1-201ENST00000502889 1188 ntBASIC22.68■■□□□ 1.22
SGO1Q5FBB7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SGO1Q5FBB7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SGO1Q5FBB7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SGO1Q5FBB7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.67■■□□□ 1.22
SGO1Q5FBB7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SGO1Q5FBB7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.67■■□□□ 1.22
SGO1Q5FBB7 HSD17B1P1-201ENST00000590052 955 ntBASIC22.67■■□□□ 1.22
SGO1Q5FBB7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SGO1Q5FBB7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SGO1Q5FBB7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SGO1Q5FBB7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SGO1Q5FBB7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.67■■□□□ 1.22
SGO1Q5FBB7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.67■■□□□ 1.22
SGO1Q5FBB7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
SGO1Q5FBB7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SGO1Q5FBB7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
SGO1Q5FBB7 KRT18P10-201ENST00000388836 1287 ntBASIC22.66■■□□□ 1.22
SGO1Q5FBB7 RARRES2P2-201ENST00000394842 485 ntBASIC22.66■■□□□ 1.22
SGO1Q5FBB7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SGO1Q5FBB7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.66■■□□□ 1.22
SGO1Q5FBB7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SGO1Q5FBB7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SGO1Q5FBB7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
SGO1Q5FBB7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SGO1Q5FBB7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.65■■□□□ 1.22
SGO1Q5FBB7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SGO1Q5FBB7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SGO1Q5FBB7 FOXO3B-201ENST00000395675 1928 ntBASIC22.65■■□□□ 1.22
SGO1Q5FBB7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.65■■□□□ 1.22
SGO1Q5FBB7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.65■■□□□ 1.22
SGO1Q5FBB7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SGO1Q5FBB7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.64■■□□□ 1.22
SGO1Q5FBB7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.64■■□□□ 1.22
SGO1Q5FBB7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
SGO1Q5FBB7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SGO1Q5FBB7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SGO1Q5FBB7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SGO1Q5FBB7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.64■■□□□ 1.21
SGO1Q5FBB7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SGO1Q5FBB7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SGO1Q5FBB7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.63■■□□□ 1.21
SGO1Q5FBB7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.63■■□□□ 1.21
SGO1Q5FBB7 SPCS2P3-201ENST00000500401 656 ntBASIC22.63■■□□□ 1.21
SGO1Q5FBB7 AC018755.3-202ENST00000596210 929 ntBASIC22.63■■□□□ 1.21
SGO1Q5FBB7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SGO1Q5FBB7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.63■■□□□ 1.21
SGO1Q5FBB7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.63■■□□□ 1.21
SGO1Q5FBB7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SGO1Q5FBB7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SGO1Q5FBB7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
SGO1Q5FBB7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SGO1Q5FBB7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SGO1Q5FBB7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SGO1Q5FBB7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SGO1Q5FBB7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SGO1Q5FBB7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SGO1Q5FBB7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
SGO1Q5FBB7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
SGO1Q5FBB7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SGO1Q5FBB7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SGO1Q5FBB7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
SGO1Q5FBB7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
SGO1Q5FBB7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SGO1Q5FBB7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
SGO1Q5FBB7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.61■■□□□ 1.21
SGO1Q5FBB7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.61■■□□□ 1.21
SGO1Q5FBB7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
SGO1Q5FBB7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
SGO1Q5FBB7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
SGO1Q5FBB7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SGO1Q5FBB7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SGO1Q5FBB7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
SGO1Q5FBB7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
SGO1Q5FBB7 MIR6089-201ENST00000616698 64 ntBASIC22.6■■□□□ 1.21
SGO1Q5FBB7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
SGO1Q5FBB7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SGO1Q5FBB7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SGO1Q5FBB7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SGO1Q5FBB7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SGO1Q5FBB7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SGO1Q5FBB7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.59■■□□□ 1.21
SGO1Q5FBB7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SGO1Q5FBB7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SGO1Q5FBB7 U85056.1-201ENST00000616429 682 ntBASIC22.59■■□□□ 1.21
SGO1Q5FBB7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SGO1Q5FBB7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SGO1Q5FBB7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SGO1Q5FBB7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SGO1Q5FBB7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.58■■□□□ 1.21
SGO1Q5FBB7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SGO1Q5FBB7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms