Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM60Q495X7 SRD5A1P1-201ENST00000442297 786 ntBASIC26.12■■□□□ 1.77
TRIM60Q495X7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.12■■□□□ 1.77
TRIM60Q495X7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.12■■□□□ 1.77
TRIM60Q495X7 AP004609.3-201ENST00000610705 1884 ntBASIC26.12■■□□□ 1.77
TRIM60Q495X7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.12■■□□□ 1.77
TRIM60Q495X7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM60Q495X7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.12■■□□□ 1.77
TRIM60Q495X7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRIM60Q495X7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TRIM60Q495X7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.11■■□□□ 1.77
TRIM60Q495X7 MIR6722-201ENST00000617286 78 ntBASIC26.11■■□□□ 1.77
TRIM60Q495X7 ANKRD20A6P-201ENST00000618763 204 ntBASIC26.11■■□□□ 1.77
TRIM60Q495X7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
TRIM60Q495X7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TRIM60Q495X7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRIM60Q495X7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.1■■□□□ 1.77
TRIM60Q495X7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.09■■□□□ 1.77
TRIM60Q495X7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.09■■□□□ 1.77
TRIM60Q495X7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
TRIM60Q495X7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.09■■□□□ 1.77
TRIM60Q495X7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
TRIM60Q495X7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TRIM60Q495X7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TRIM60Q495X7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.08■■□□□ 1.77
TRIM60Q495X7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRIM60Q495X7 AF213884.3-201ENST00000563833 479 ntBASIC26.08■■□□□ 1.77
TRIM60Q495X7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.08■■□□□ 1.77
TRIM60Q495X7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRIM60Q495X7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
TRIM60Q495X7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
TRIM60Q495X7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
TRIM60Q495X7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.07■■□□□ 1.76
TRIM60Q495X7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TRIM60Q495X7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.07■■□□□ 1.76
TRIM60Q495X7 AL136967.2-201ENST00000623968 743 ntBASIC26.07■■□□□ 1.76
TRIM60Q495X7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.07■■□□□ 1.76
TRIM60Q495X7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TRIM60Q495X7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.06■■□□□ 1.76
TRIM60Q495X7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TRIM60Q495X7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
TRIM60Q495X7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TRIM60Q495X7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRIM60Q495X7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
TRIM60Q495X7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRIM60Q495X7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.05■■□□□ 1.76
TRIM60Q495X7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.05■■□□□ 1.76
TRIM60Q495X7 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.05■■□□□ 1.76
TRIM60Q495X7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.05■■□□□ 1.76
TRIM60Q495X7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.05■■□□□ 1.76
TRIM60Q495X7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
TRIM60Q495X7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.03■■□□□ 1.76
TRIM60Q495X7 MIR6821-201ENST00000617625 74 ntBASIC26.03■■□□□ 1.76
TRIM60Q495X7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TRIM60Q495X7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
TRIM60Q495X7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.03■■□□□ 1.76
TRIM60Q495X7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.02■■□□□ 1.76
TRIM60Q495X7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TRIM60Q495X7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.02■■□□□ 1.76
TRIM60Q495X7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
TRIM60Q495X7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TRIM60Q495X7 FOXO3B-201ENST00000395675 1928 ntBASIC26.02■■□□□ 1.76
TRIM60Q495X7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TRIM60Q495X7 MIR939-201ENST00000401314 82 ntBASIC26.01■■□□□ 1.75
TRIM60Q495X7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.01■■□□□ 1.75
TRIM60Q495X7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TRIM60Q495X7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TRIM60Q495X7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.01■■□□□ 1.75
TRIM60Q495X7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26■■□□□ 1.75
TRIM60Q495X7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26■■□□□ 1.75
TRIM60Q495X7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26■■□□□ 1.75
TRIM60Q495X7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26■■□□□ 1.75
TRIM60Q495X7 AP001330.3-201ENST00000520123 633 ntBASIC26■■□□□ 1.75
TRIM60Q495X7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
TRIM60Q495X7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
TRIM60Q495X7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
TRIM60Q495X7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
TRIM60Q495X7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.99■■□□□ 1.75
TRIM60Q495X7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.99■■□□□ 1.75
TRIM60Q495X7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TRIM60Q495X7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
TRIM60Q495X7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TRIM60Q495X7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TRIM60Q495X7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.98■■□□□ 1.75
TRIM60Q495X7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TRIM60Q495X7 AC097381.1-201ENST00000429019 1296 ntBASIC25.98■■□□□ 1.75
TRIM60Q495X7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TRIM60Q495X7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.98■■□□□ 1.75
TRIM60Q495X7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
TRIM60Q495X7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TRIM60Q495X7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TRIM60Q495X7 AC087623.3-201ENST00000607047 1098 ntBASIC25.97■■□□□ 1.75
TRIM60Q495X7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TRIM60Q495X7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TRIM60Q495X7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TRIM60Q495X7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TRIM60Q495X7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TRIM60Q495X7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
TRIM60Q495X7 AL162430.1-201ENST00000480705 870 ntBASIC25.96■■□□□ 1.75
TRIM60Q495X7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms