Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.4■□□□□ 0.86
TBC1D28Q2M2D7 MIR4508-201ENST00000584178 70 ntBASIC20.4■□□□□ 0.86
TBC1D28Q2M2D7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TBC1D28Q2M2D7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TBC1D28Q2M2D7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D28Q2M2D7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TBC1D28Q2M2D7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.39■□□□□ 0.85
TBC1D28Q2M2D7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.39■□□□□ 0.85
TBC1D28Q2M2D7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D28Q2M2D7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D28Q2M2D7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D28Q2M2D7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D28Q2M2D7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D28Q2M2D7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TBC1D28Q2M2D7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.38■□□□□ 0.85
TBC1D28Q2M2D7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D28Q2M2D7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TBC1D28Q2M2D7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.38■□□□□ 0.85
TBC1D28Q2M2D7 AC022211.4-201ENST00000625094 2161 ntBASIC20.38■□□□□ 0.85
TBC1D28Q2M2D7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D28Q2M2D7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.38■□□□□ 0.85
TBC1D28Q2M2D7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D28Q2M2D7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TBC1D28Q2M2D7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TBC1D28Q2M2D7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TBC1D28Q2M2D7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TBC1D28Q2M2D7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TBC1D28Q2M2D7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TBC1D28Q2M2D7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TBC1D28Q2M2D7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D28Q2M2D7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TBC1D28Q2M2D7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D28Q2M2D7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D28Q2M2D7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D28Q2M2D7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D28Q2M2D7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D28Q2M2D7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D28Q2M2D7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D28Q2M2D7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D28Q2M2D7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D28Q2M2D7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D28Q2M2D7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D28Q2M2D7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TBC1D28Q2M2D7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TBC1D28Q2M2D7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D28Q2M2D7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TBC1D28Q2M2D7 AC011551.1-201ENST00000614101 683 ntBASIC20.35■□□□□ 0.85
TBC1D28Q2M2D7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.35■□□□□ 0.85
TBC1D28Q2M2D7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.35■□□□□ 0.85
TBC1D28Q2M2D7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D28Q2M2D7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.35■□□□□ 0.85
TBC1D28Q2M2D7 AC142381.3-201ENST00000568208 1670 ntBASIC20.35■□□□□ 0.85
TBC1D28Q2M2D7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.35■□□□□ 0.85
TBC1D28Q2M2D7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D28Q2M2D7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D28Q2M2D7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TBC1D28Q2M2D7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D28Q2M2D7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.34■□□□□ 0.85
TBC1D28Q2M2D7 AC103834.1-201ENST00000520383 144 ntBASIC20.34■□□□□ 0.85
TBC1D28Q2M2D7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.34■□□□□ 0.85
TBC1D28Q2M2D7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
TBC1D28Q2M2D7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.34■□□□□ 0.85
TBC1D28Q2M2D7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.34■□□□□ 0.85
TBC1D28Q2M2D7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D28Q2M2D7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D28Q2M2D7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TBC1D28Q2M2D7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TBC1D28Q2M2D7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.33■□□□□ 0.85
TBC1D28Q2M2D7 THA1P-201ENST00000590384 1145 ntBASIC20.33■□□□□ 0.85
TBC1D28Q2M2D7 MIR6089-201ENST00000616698 64 ntBASIC20.33■□□□□ 0.85
TBC1D28Q2M2D7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.33■□□□□ 0.84
TBC1D28Q2M2D7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.33■□□□□ 0.84
TBC1D28Q2M2D7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.33■□□□□ 0.84
TBC1D28Q2M2D7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TBC1D28Q2M2D7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TBC1D28Q2M2D7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TBC1D28Q2M2D7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.33■□□□□ 0.84
TBC1D28Q2M2D7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TBC1D28Q2M2D7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.32■□□□□ 0.84
TBC1D28Q2M2D7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TBC1D28Q2M2D7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TBC1D28Q2M2D7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TBC1D28Q2M2D7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.32■□□□□ 0.84
TBC1D28Q2M2D7 AC090877.2-201ENST00000558441 1738 ntBASIC20.32■□□□□ 0.84
TBC1D28Q2M2D7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TBC1D28Q2M2D7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TBC1D28Q2M2D7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.31■□□□□ 0.84
TBC1D28Q2M2D7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TBC1D28Q2M2D7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TBC1D28Q2M2D7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TBC1D28Q2M2D7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.3■□□□□ 0.84
TBC1D28Q2M2D7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
TBC1D28Q2M2D7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TBC1D28Q2M2D7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TBC1D28Q2M2D7 KRT18P24-201ENST00000344739 1156 ntBASIC20.3■□□□□ 0.84
TBC1D28Q2M2D7 RARRES2P1-201ENST00000474487 481 ntBASIC20.3■□□□□ 0.84
TBC1D28Q2M2D7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.3■□□□□ 0.84
TBC1D28Q2M2D7 AC120024.1-201ENST00000562672 995 ntBASIC20.3■□□□□ 0.84
TBC1D28Q2M2D7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
TBC1D28Q2M2D7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms